Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21478 and SM_b21479 are separated by 316 nucleotides SM_b21479 and SM_b21480 are separated by 44 nucleotides SM_b21480 and SM_b21481 overlap by 7 nucleotides SM_b21481 and SM_b21482 are separated by 296 nucleotides
SM_b21478: SM_b21478 - hypothetical protein, at 1,402,093 to 1,402,710
_b21478
SM_b21479: SM_b21479 - hypothetical protein, at 1,403,027 to 1,403,329
_b21479
SM_b21480: SM_b21480 - hypothetical protein, at 1,403,374 to 1,403,634
_b21480
SM_b21481: SM_b21481 - hypothetical protein, at 1,403,628 to 1,404,104
_b21481
SM_b21482: SM_b21482 - hypothetical protein, at 1,404,401 to 1,404,703
_b21482
Position (kb)
1403
1404 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1402.401 kb on + strand, within SM_b21478 at 1402.402 kb on - strand at 1402.402 kb on - strand, within SM_b21478 at 1402.514 kb on - strand, within SM_b21478 at 1402.668 kb on + strand at 1402.669 kb on - strand at 1402.669 kb on - strand at 1402.671 kb on + strand at 1402.671 kb on + strand at 1402.672 kb on - strand at 1402.684 kb on - strand at 1402.686 kb on + strand at 1402.686 kb on + strand at 1402.686 kb on + strand at 1403.285 kb on + strand, within SM_b21479 at 1403.285 kb on + strand, within SM_b21479 at 1403.393 kb on - strand at 1403.393 kb on - strand at 1403.422 kb on - strand, within SM_b21480 at 1403.919 kb on + strand, within SM_b21481 at 1403.919 kb on + strand, within SM_b21481 at 1403.919 kb on + strand, within SM_b21481 at 1403.919 kb on + strand, within SM_b21481 at 1403.919 kb on + strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1403.920 kb on - strand, within SM_b21481 at 1404.026 kb on + strand, within SM_b21481 at 1404.063 kb on + strand at 1404.063 kb on + strand at 1404.064 kb on - strand at 1404.064 kb on - strand at 1404.094 kb on + strand at 1404.095 kb on - strand at 1404.195 kb on + strand at 1404.195 kb on + strand at 1404.196 kb on - strand at 1404.297 kb on + strand at 1404.298 kb on - strand at 1404.298 kb on - strand at 1404.352 kb on - strand at 1404.364 kb on + strand at 1404.602 kb on + strand, within SM_b21482 at 1404.603 kb on - strand, within SM_b21482
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,402,401 + SM_b21478 0.50 -0.1 1,402,402 - +0.2 1,402,402 - SM_b21478 0.50 +0.3 1,402,514 - SM_b21478 0.68 -0.9 1,402,668 + -0.6 1,402,669 - -0.8 1,402,669 - -0.2 1,402,671 + -2.8 1,402,671 + -0.5 1,402,672 - -0.1 1,402,684 - -0.3 1,402,686 + +0.6 1,402,686 + -1.3 1,402,686 + -0.2 1,403,285 + SM_b21479 0.85 -0.6 1,403,285 + SM_b21479 0.85 -0.4 1,403,393 - +0.4 1,403,393 - -0.2 1,403,422 - SM_b21480 0.18 +0.9 1,403,919 + SM_b21481 0.61 +0.4 1,403,919 + SM_b21481 0.61 +0.5 1,403,919 + SM_b21481 0.61 -0.8 1,403,919 + SM_b21481 0.61 -0.0 1,403,919 + SM_b21481 0.61 +0.2 1,403,920 - SM_b21481 0.61 -0.2 1,403,920 - SM_b21481 0.61 -0.4 1,403,920 - SM_b21481 0.61 +0.5 1,403,920 - SM_b21481 0.61 -1.6 1,403,920 - SM_b21481 0.61 -0.4 1,403,920 - SM_b21481 0.61 +0.2 1,403,920 - SM_b21481 0.61 +0.3 1,404,026 + SM_b21481 0.83 +1.8 1,404,063 + +0.5 1,404,063 + -0.4 1,404,064 - -0.1 1,404,064 - +0.9 1,404,094 + -1.0 1,404,095 - +1.4 1,404,195 + -1.7 1,404,195 + -1.8 1,404,196 - -0.5 1,404,297 + -0.5 1,404,298 - +0.1 1,404,298 - -1.0 1,404,352 - +0.0 1,404,364 + -1.9 1,404,602 + SM_b21482 0.66 -1.5 1,404,603 - SM_b21482 0.67 +0.4
Or see this region's nucleotide sequence