Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20419 and SM_b20420 are separated by 121 nucleotides SM_b20420 and SM_b20421 are separated by 152 nucleotides
SM_b20419: SM_b20419 - glycerol-3-phosphate ABC transporter ATP-binding protein, at 432,821 to 433,870
_b20419
SM_b20420: SM_b20420 - glutathione S-transferase, at 433,992 to 434,618
_b20420
SM_b20421: SM_b20421 - transposase, at 434,771 to 435,847
_b20421
Position (kb) 433
434
435 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 433.039 kb on + strand, within SM_b20419 at 433.057 kb on + strand, within SM_b20419 at 433.057 kb on + strand, within SM_b20419 at 433.090 kb on + strand, within SM_b20419 at 433.115 kb on + strand, within SM_b20419 at 433.132 kb on + strand, within SM_b20419 at 433.133 kb on - strand, within SM_b20419 at 433.389 kb on - strand, within SM_b20419 at 433.389 kb on - strand, within SM_b20419 at 433.389 kb on - strand, within SM_b20419 at 433.389 kb on - strand, within SM_b20419 at 433.642 kb on + strand, within SM_b20419 at 433.643 kb on - strand, within SM_b20419 at 433.727 kb on + strand, within SM_b20419 at 433.727 kb on + strand, within SM_b20419 at 433.728 kb on - strand, within SM_b20419 at 433.868 kb on + strand at 434.003 kb on - strand at 434.003 kb on - strand at 434.003 kb on - strand at 434.004 kb on + strand at 434.011 kb on + strand at 434.089 kb on + strand, within SM_b20420 at 434.090 kb on - strand, within SM_b20420 at 434.090 kb on - strand, within SM_b20420 at 434.202 kb on + strand, within SM_b20420 at 434.202 kb on + strand, within SM_b20420 at 434.203 kb on - strand, within SM_b20420 at 434.203 kb on - strand, within SM_b20420 at 434.217 kb on + strand, within SM_b20420 at 434.234 kb on + strand, within SM_b20420 at 434.234 kb on + strand, within SM_b20420 at 434.235 kb on - strand, within SM_b20420 at 434.268 kb on + strand, within SM_b20420 at 434.268 kb on + strand, within SM_b20420 at 434.268 kb on + strand, within SM_b20420 at 434.458 kb on + strand, within SM_b20420 at 434.459 kb on - strand, within SM_b20420 at 434.459 kb on - strand, within SM_b20420 at 434.459 kb on - strand, within SM_b20420 at 434.462 kb on + strand, within SM_b20420 at 434.462 kb on + strand, within SM_b20420 at 434.484 kb on + strand, within SM_b20420 at 434.485 kb on - strand at 434.538 kb on - strand, within SM_b20420 at 434.544 kb on + strand, within SM_b20420 at 434.559 kb on + strand at 434.559 kb on + strand at 434.560 kb on - strand at 434.560 kb on - strand at 434.560 kb on - strand at 434.560 kb on - strand at 434.617 kb on - strand at 434.703 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 433,039 + SM_b20419 0.21 -0.4 433,057 + SM_b20419 0.22 +0.7 433,057 + SM_b20419 0.22 -1.2 433,090 + SM_b20419 0.26 -1.0 433,115 + SM_b20419 0.28 -0.3 433,132 + SM_b20419 0.30 +0.4 433,133 - SM_b20419 0.30 +2.0 433,389 - SM_b20419 0.54 -0.7 433,389 - SM_b20419 0.54 +0.8 433,389 - SM_b20419 0.54 +0.3 433,389 - SM_b20419 0.54 +0.5 433,642 + SM_b20419 0.78 +0.8 433,643 - SM_b20419 0.78 -1.7 433,727 + SM_b20419 0.86 -0.2 433,727 + SM_b20419 0.86 -0.0 433,728 - SM_b20419 0.86 +0.5 433,868 + +0.0 434,003 - +0.3 434,003 - +0.3 434,003 - -0.5 434,004 + +0.0 434,011 + +0.2 434,089 + SM_b20420 0.15 -1.6 434,090 - SM_b20420 0.16 +3.4 434,090 - SM_b20420 0.16 +0.1 434,202 + SM_b20420 0.33 +1.1 434,202 + SM_b20420 0.33 -0.1 434,203 - SM_b20420 0.34 -0.8 434,203 - SM_b20420 0.34 +0.9 434,217 + SM_b20420 0.36 -1.6 434,234 + SM_b20420 0.39 -0.9 434,234 + SM_b20420 0.39 +0.3 434,235 - SM_b20420 0.39 +0.0 434,268 + SM_b20420 0.44 -0.6 434,268 + SM_b20420 0.44 +1.5 434,268 + SM_b20420 0.44 +0.2 434,458 + SM_b20420 0.74 +0.2 434,459 - SM_b20420 0.74 +0.1 434,459 - SM_b20420 0.74 +0.8 434,459 - SM_b20420 0.74 -0.4 434,462 + SM_b20420 0.75 +0.1 434,462 + SM_b20420 0.75 -1.0 434,484 + SM_b20420 0.78 -0.6 434,485 - +0.5 434,538 - SM_b20420 0.87 +0.2 434,544 + SM_b20420 0.88 +1.6 434,559 + -0.1 434,559 + -0.3 434,560 - +0.4 434,560 - +0.9 434,560 - +0.2 434,560 - -1.0 434,617 - -0.2 434,703 - +4.7
Or see this region's nucleotide sequence