Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5385

Experiment: benzoic 0.58 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.58 mg/ml
116,421	+		Pf1N1B4_5383	0.54	-1.5
116,421	+		Pf1N1B4_5383	0.54	-1.8
116,421	+		Pf1N1B4_5383	0.54	-1.3
116,421	+		Pf1N1B4_5383	0.54	-0.5
116,421	+		Pf1N1B4_5383	0.54	-2.1
116,421	+		Pf1N1B4_5383	0.54	-1.3
116,421	+		Pf1N1B4_5383	0.54	-1.4
116,421	+		Pf1N1B4_5383	0.54	-2.8
116,421	+		Pf1N1B4_5383	0.54	-1.1
116,421	+		Pf1N1B4_5383	0.54	-1.6
116,421	+		Pf1N1B4_5383	0.54	-1.1
116,421	+		Pf1N1B4_5383	0.54	-2.1
116,421	+		Pf1N1B4_5383	0.54	-2.0
116,421	+		Pf1N1B4_5383	0.54	-3.8
116,421	+		Pf1N1B4_5383	0.54	-1.7
116,421	+		Pf1N1B4_5383	0.54	-3.6
116,421	+		Pf1N1B4_5383	0.54	-1.1
116,421	+		Pf1N1B4_5383	0.54	-2.3
116,421	+		Pf1N1B4_5383	0.54	-1.8
116,422	-		Pf1N1B4_5383	0.54	-1.4
116,422	-		Pf1N1B4_5383	0.54	-1.5
116,431	+		Pf1N1B4_5383	0.57	-2.0
116,431	+		Pf1N1B4_5383	0.57	-1.9
116,431	+		Pf1N1B4_5383	0.57	-2.8
116,431	+		Pf1N1B4_5383	0.57	-2.5
116,431	+		Pf1N1B4_5383	0.57	-2.4
116,431	+		Pf1N1B4_5383	0.57	-2.1
116,431	+		Pf1N1B4_5383	0.57	-1.1
116,431	+		Pf1N1B4_5383	0.57	-2.3
116,518	+		Pf1N1B4_5383	0.84	-2.0
116,519	-		Pf1N1B4_5383	0.84	+0.4
116,531	+		Pf1N1B4_5383	0.88	-1.0
116,531	+		Pf1N1B4_5383	0.88	-3.9
116,531	+		Pf1N1B4_5383	0.88	-0.6
116,531	+		Pf1N1B4_5383	0.88	-1.3
116,531	+		Pf1N1B4_5383	0.88	-1.4
116,531	+		Pf1N1B4_5383	0.88	+0.8
116,531	+		Pf1N1B4_5383	0.88	-2.3
116,531	+		Pf1N1B4_5383	0.88	-1.8
116,532	-		Pf1N1B4_5383	0.88	+0.2
116,572	+				-1.6
116,572	+				-1.6
116,572	+				-0.9
116,582	+				-1.5
116,582	+				-2.4
116,582	+				-1.8
116,582	+				-2.1
116,582	+				-2.5
116,583	-				-0.3
116,622	+				-1.5
116,622	+				-1.6
116,622	+				-0.8
116,623	-				+1.1
116,663	-				-0.3
116,672	-				-0.8
116,694	-				+1.9
116,722	+				+0.4
116,722	+				+1.1
116,723	-				+0.5
116,735	+				+1.1
116,752	+				+0.1
116,752	+				-0.6
116,752	+				+0.3
116,753	-				+0.5
116,790	+				-0.5
116,791	-				-0.3
116,791	-				-0.8
116,791	-				-0.5
116,796	+				+0.6
116,796	+				-1.2
116,796	+				+0.2
116,797	-				-0.8
116,797	-				+0.9
116,797	-				+0.6
116,802	+				+0.5
116,802	+				-0.4
116,802	+				-1.5
116,802	+				-0.7
116,802	+				-1.3
116,802	+				-0.0
116,802	+				-0.5
116,802	+				-0.5
116,803	-				-0.1
116,803	-				+1.8
116,803	-				-0.2
116,803	-				+0.9
116,805	+				-0.5
116,828	+				-0.5
116,849	+				-1.2
116,849	+				-1.3
116,849	+				-1.8
116,849	+				+0.4
116,850	-				-0.4
117,021	+		Pf1N1B4_5384	0.30	-1.8
117,022	-		Pf1N1B4_5384	0.30	-0.8
117,022	-		Pf1N1B4_5384	0.30	+0.2
117,051	+		Pf1N1B4_5384	0.47	-0.9
117,052	-		Pf1N1B4_5384	0.48	-0.7
117,052	-		Pf1N1B4_5384	0.48	-0.5
117,185	-				+0.1
117,241	+				-0.2
117,252	+				-0.1
117,291	+		Pf1N1B4_5385	0.16	+0.1
117,362	+		Pf1N1B4_5385	0.35	-2.5
117,362	+				+0.3
117,362	+		Pf1N1B4_5385	0.35	-0.2
117,362	+		Pf1N1B4_5385	0.35	+0.5
117,362	+		Pf1N1B4_5385	0.35	-1.3
117,362	+		Pf1N1B4_5385	0.35	-0.5
117,362	+		Pf1N1B4_5385	0.35	-0.9
117,453	+		Pf1N1B4_5385	0.59	-0.5
117,453	+		Pf1N1B4_5385	0.59	-0.9
117,454	-		Pf1N1B4_5385	0.59	+0.1
117,454	-		Pf1N1B4_5385	0.59	+0.6
117,570	+		Pf1N1B4_5385	0.89	-2.1
117,570	+		Pf1N1B4_5385	0.89	-0.9
117,570	+		Pf1N1B4_5385	0.89	-0.7
117,623	+				-0.5
117,624	-				+1.1
117,768	+				+0.1
117,780	+				+0.9
117,780	+				-1.5
117,842	-		Pf1N1B4_5386	0.20	+0.8
117,843	+		Pf1N1B4_5386	0.21	-1.2
117,843	+		Pf1N1B4_5386	0.21	+0.6
117,843	+		Pf1N1B4_5386	0.21	-0.0
117,843	+		Pf1N1B4_5386	0.21	+1.1
117,844	-		Pf1N1B4_5386	0.21	-0.5
117,844	-				-0.5
117,844	-		Pf1N1B4_5386	0.21	+0.1
117,982	+				-0.1
118,004	+				-0.8
118,025	+				+0.1
118,055	+				-0.5
118,085	+				-0.4
118,100	+				-0.5
118,100	+				+0.6
118,144	+				-0.3
118,145	-				+0.1
118,145	-				-1.2
118,145	-				-1.8
118,145	-				-1.3
118,145	-				+0.1
118,190	+				-2.4
118,190	+				-0.1
118,191	-				+0.6
118,191	-				+0.1
118,194	+				+0.5
118,194	+				+2.6
118,194	+				+1.5
118,217	+				-0.7
118,217	+				-0.5
118,218	-				+1.2
118,218	-				-0.2
118,218	-				-1.1
118,218	-				+1.5
118,218	-				+0.5
118,247	+				-0.9
118,247	+				+0.6
118,247	+				-0.9
118,247	+				-0.5
118,251	+				-2.4
118,251	+				-0.4
118,252	-				-0.8
118,306	+				+1.6
118,306	+				+1.6
118,306	+				-1.8
118,306	+				-0.9
118,306	+				-1.2
118,306	+				+0.5
118,307	-				+0.6
118,307	-				+0.1
118,415	-				+0.5
118,504	+				-2.5
118,608	+		Pf1N1B4_5387	0.40	+0.6