Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2713

Experiment: benzoic 0.58 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.58 mg/ml
3,050,192	-		Pf1N1B4_2712	0.34	-1.4
3,050,543	+		Pf1N1B4_2712	0.60	+2.8
3,050,545	+				-0.4
3,050,545	+		Pf1N1B4_2712	0.60	+0.6
3,050,545	+		Pf1N1B4_2712	0.60	-0.4
3,050,545	+		Pf1N1B4_2712	0.60	+1.2
3,050,569	+		Pf1N1B4_2712	0.62	+0.2
3,050,569	+		Pf1N1B4_2712	0.62	+0.2
3,050,599	+		Pf1N1B4_2712	0.64	-0.2
3,050,600	-				-1.1
3,050,600	-		Pf1N1B4_2712	0.64	-0.0
3,050,600	-		Pf1N1B4_2712	0.64	+0.0
3,050,600	-		Pf1N1B4_2712	0.64	-0.2
3,050,687	+		Pf1N1B4_2712	0.70	-1.6
3,050,742	+		Pf1N1B4_2712	0.74	+1.2
3,050,998	+				+1.2
3,051,031	+				+0.2
3,051,031	+				-0.8
3,051,031	+				-0.6
3,051,051	+				-0.2
3,051,084	+				-0.4
3,051,084	+				+1.7
3,051,085	-				-0.6
3,051,086	+				+0.6
3,051,087	-				-1.1
3,051,109	+				-0.8
3,051,135	+				+0.3
3,051,135	+				-0.4
3,051,135	+				-1.8
3,051,136	-				+0.8
3,051,136	-				-0.4
3,051,136	-				-0.4
3,051,136	-				+0.4
3,051,136	-				+0.2
3,051,136	-				+0.6
3,051,136	-				-0.1
3,051,136	-				+1.2
3,051,137	+				+1.2
3,051,137	+				-0.8
3,051,138	-				+0.2
3,051,138	-				+1.2
3,051,138	-				-0.7
3,051,138	-				-0.0
3,051,138	-				+0.8
3,051,138	-				+1.9
3,051,138	-				-2.8
3,051,138	-				+0.8
3,051,138	-				+0.2
3,051,206	+				+2.2
3,051,206	+				-0.1
3,051,206	+				-2.5
3,051,206	+				-2.1
3,051,206	+				+0.4
3,051,206	+				+1.2
3,051,207	-				+1.2
3,051,207	-				+0.2
3,051,207	-				-0.0
3,051,207	-				+1.9
3,051,207	-				-0.6
3,051,207	-				-0.1
3,051,207	-				+1.2
3,051,207	-				+0.8
3,051,207	-				-1.1
3,051,207	-				+0.7
3,051,239	+		Pf1N1B4_2713	0.17	-2.5
3,051,240	-		Pf1N1B4_2713	0.18	-1.4
3,051,249	-				-0.8
3,051,249	-		Pf1N1B4_2713	0.20	+1.2
3,051,249	-		Pf1N1B4_2713	0.20	-0.0
3,051,263	+		Pf1N1B4_2713	0.25	-0.8
3,051,264	-		Pf1N1B4_2713	0.25	+0.2
3,051,264	-		Pf1N1B4_2713	0.25	-0.4
3,051,565	+				-0.4
3,051,566	-				+0.4
3,051,566	-				+0.8
3,051,566	-				-1.6
3,051,566	-				-0.8
3,051,706	+				+0.7
3,051,706	+				-1.6
3,051,706	+				-0.6
3,051,706	+				-0.4
3,051,706	+				-0.2
3,051,706	+				+1.2
3,051,707	-		Pf1N1B4_2714	0.10	-0.7
3,051,707	-		Pf1N1B4_2714	0.10	+0.7
3,051,707	-		Pf1N1B4_2714	0.10	-0.8
3,051,707	-		Pf1N1B4_2714	0.10	+1.2
3,051,707	-		Pf1N1B4_2714	0.10	-0.4
3,051,707	-		Pf1N1B4_2714	0.10	-0.8
3,051,707	-		Pf1N1B4_2714	0.10	-2.3
3,051,707	-		Pf1N1B4_2714	0.10	-0.0
3,051,707	-		Pf1N1B4_2714	0.10	+0.9
3,051,711	-		Pf1N1B4_2714	0.11	-2.0
3,052,218	-				+0.2
3,052,274	-		Pf1N1B4_2715	0.25	+0.7
3,052,274	-		Pf1N1B4_2715	0.25	-1.1
3,052,274	-		Pf1N1B4_2715	0.25	-0.1
3,052,274	-		Pf1N1B4_2715	0.25	+0.2
3,052,274	-		Pf1N1B4_2715	0.25	+1.2
3,052,274	-		Pf1N1B4_2715	0.25	+0.2
3,052,290	-		Pf1N1B4_2715	0.35	+0.4
3,052,327	-		Pf1N1B4_2715	0.57	+0.3
3,052,327	-		Pf1N1B4_2715	0.57	+0.0
3,052,327	-		Pf1N1B4_2715	0.57	-0.0
3,052,327	-		Pf1N1B4_2715	0.57	+0.5
3,052,327	-		Pf1N1B4_2715	0.57	+0.3
3,052,327	-		Pf1N1B4_2715	0.57	+0.2
3,052,327	-		Pf1N1B4_2715	0.57	+0.2
3,052,327	-		Pf1N1B4_2715	0.57	+0.4
3,052,329	-		Pf1N1B4_2715	0.58	+0.5
3,052,329	-		Pf1N1B4_2715	0.58	-0.7
3,052,329	-		Pf1N1B4_2715	0.58	+0.6
3,052,329	-		Pf1N1B4_2715	0.58	+0.8
3,052,329	-		Pf1N1B4_2715	0.58	-1.1
3,052,329	-		Pf1N1B4_2715	0.58	-0.4
3,052,329	-		Pf1N1B4_2715	0.58	-1.1
3,052,329	-		Pf1N1B4_2715	0.58	-0.3
3,052,351	-		Pf1N1B4_2715	0.72	+1.2
3,052,351	-		Pf1N1B4_2715	0.72	-0.1
3,052,385	-				-1.1
3,052,432	-				+0.5
3,052,432	-				+0.7