Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01728

Experiment: PYE with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.025 mg/ml
1,855,520	+		CCNA_01727	0.53	+0.7
1,855,528	-		CCNA_01727	0.53	+0.3
1,855,528	-		CCNA_01727	0.53	+1.7
1,855,601	-		CCNA_01727	0.58	+0.8
1,855,647	+		CCNA_01727	0.61	-0.2
1,855,655	-		CCNA_01727	0.61	+0.8
1,855,657	+		CCNA_01727	0.62	+0.7
1,855,726	+		CCNA_01727	0.66	+0.5
1,855,734	-		CCNA_01727	0.67	+0.5
1,855,776	-		CCNA_01727	0.70	+3.1
1,855,810	+		CCNA_01727	0.72	-2.3
1,855,861	+		CCNA_01727	0.75	+0.6
1,855,861	+		CCNA_01727	0.75	+1.3
1,855,861	+		CCNA_01727	0.75	-0.0
1,855,894	+		CCNA_01727	0.77	-0.4
1,855,937	-		CCNA_01727	0.80	+1.0
1,855,981	-		CCNA_01727	0.83	-0.1
1,856,116	-				+0.2
1,856,169	+				-1.2
1,856,218	+				-1.2
1,856,226	-				-1.0
1,856,226	-				+0.4
1,856,226	-				+0.6
1,856,226	-				-0.3
1,856,287	+				-1.0
1,856,319	-				+1.5
1,856,455	+				+1.1
1,856,464	+				+0.1
1,856,465	+				-0.6
1,856,472	+				+0.2
1,856,473	-				+2.3
1,856,501	-		CCNA_01728	0.11	+1.8
1,856,501	-		CCNA_01728	0.11	+1.1
1,856,518	+		CCNA_01728	0.13	-0.9
1,856,533	-		CCNA_01728	0.15	+1.2
1,856,544	+		CCNA_01728	0.16	+0.9
1,856,633	-		CCNA_01728	0.28	+1.4
1,856,659	-		CCNA_01728	0.32	+1.0
1,856,663	+		CCNA_01728	0.32	-0.2
1,856,714	+		CCNA_01728	0.39	-1.1
1,856,714	+		CCNA_01728	0.39	+0.7
1,856,735	+		CCNA_01728	0.42	-0.2
1,856,755	+		CCNA_01728	0.44	+0.7
1,856,776	+		CCNA_01728	0.47	+0.3
1,856,784	+		CCNA_01728	0.48	-1.3
1,856,802	-		CCNA_01728	0.51	+1.2
1,856,828	-		CCNA_01728	0.54	+2.0
1,856,832	-		CCNA_01728	0.54	+0.9
1,856,889	-		CCNA_01728	0.62	+1.9
1,856,924	+		CCNA_01728	0.67	+2.3
1,856,952	-		CCNA_01728	0.70	+1.7
1,856,958	+		CCNA_01728	0.71	-0.9
1,856,966	-		CCNA_01728	0.72	+1.3
1,856,966	-		CCNA_01728	0.72	+1.4
1,857,057	-		CCNA_01728	0.84	+1.7
1,857,058	-		CCNA_01728	0.84	+0.7
1,857,083	-		CCNA_01728	0.88	+1.9
1,857,083	-		CCNA_01728	0.88	+1.7
1,857,089	-		CCNA_01728	0.88	+1.9
1,857,093	-		CCNA_01728	0.89	+0.9
1,857,133	-				+1.5
1,857,162	-				+1.2
1,857,162	-				+1.5
1,857,183	+				-2.1
1,857,183	+				+1.0
1,857,191	-				+0.9
1,857,227	+				+0.2
1,857,230	-				+0.0
1,857,230	-				+0.4
1,857,230	-				+0.8
1,857,255	+				-0.1
1,857,255	+				-0.1
1,857,263	-				-0.3
1,857,360	-		CCNA_01729	0.13	+0.8
1,857,541	-		CCNA_01729	0.31	+2.3
1,857,570	+		CCNA_01729	0.34	+0.5
1,857,797	+		CCNA_01729	0.57	+1.2
1,857,797	+		CCNA_01729	0.57	+0.7
1,857,825	+		CCNA_01729	0.59	+0.9
1,857,868	-		CCNA_01729	0.64	+0.9
1,857,878	-		CCNA_01729	0.64	-0.1
1,857,878	-		CCNA_01729	0.64	+2.7
1,857,947	+		CCNA_01729	0.71	+0.7
1,857,948	-		CCNA_01729	0.71	+1.1
1,858,029	-		CCNA_01729	0.79	+1.6