Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15205

Experiment: root sample 5; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	root sample 5; outgrowth in LB
3,204,118	-				+0.0
3,204,133	+				-0.4
3,204,134	-				+1.9
3,204,202	-		ABZR87_RS15195	0.19	-0.3
3,204,392	+		ABZR87_RS15195	0.81	+0.4
3,204,392	+		ABZR87_RS15195	0.81	-0.2
3,204,392	+		ABZR87_RS15195	0.81	-1.7
3,204,393	-		ABZR87_RS15195	0.82	+0.5
3,204,396	+		ABZR87_RS15195	0.83	-1.1
3,204,396	+		ABZR87_RS15195	0.83	+0.7
3,204,396	+		ABZR87_RS15195	0.83	+0.5
3,204,396	+		ABZR87_RS15195	0.83	+0.1
3,204,397	-		ABZR87_RS15195	0.83	+0.3
3,204,397	-		ABZR87_RS15195	0.83	-1.3
3,204,397	-		ABZR87_RS15195	0.83	-2.3
3,204,397	-		ABZR87_RS15195	0.83	+0.2
3,204,414	+		ABZR87_RS15195	0.89	+2.3
3,204,414	+		ABZR87_RS15195	0.89	+0.2
3,204,414	+		ABZR87_RS15195	0.89	+2.4
3,204,414	+		ABZR87_RS15195	0.89	+0.5
3,204,414	+		ABZR87_RS15195	0.89	-0.6
3,204,414	+		ABZR87_RS15195	0.89	-0.2
3,204,415	-		ABZR87_RS15195	0.89	+0.6
3,204,415	-		ABZR87_RS15195	0.89	+1.8
3,204,415	-		ABZR87_RS15195	0.89	-0.8
3,204,415	-		ABZR87_RS15195	0.89	+0.3
3,204,415	-		ABZR87_RS15195	0.89	-0.4
3,204,415	-		ABZR87_RS15195	0.89	-2.1
3,204,527	+				-0.8
3,204,527	+				-0.3
3,204,527	+				+0.1
3,204,528	-				-0.3
3,204,528	-				+0.4
3,204,758	+		ABZR87_RS15200	0.47	-2.1
3,204,776	+		ABZR87_RS15200	0.52	-0.8
3,204,777	-		ABZR87_RS15200	0.52	+0.1
3,204,814	+		ABZR87_RS15200	0.60	-0.8
3,204,814	+		ABZR87_RS15200	0.60	-1.0
3,204,814	+		ABZR87_RS15200	0.60	+1.3
3,204,814	+		ABZR87_RS15200	0.60	-1.6
3,204,814	+		ABZR87_RS15200	0.60	+0.1
3,204,814	+		ABZR87_RS15200	0.60	+0.8
3,204,814	+		ABZR87_RS15200	0.60	+1.1
3,204,815	-		ABZR87_RS15200	0.61	-1.8
3,204,815	-		ABZR87_RS15200	0.61	+2.7
3,204,815	-		ABZR87_RS15200	0.61	-0.9
3,204,815	-		ABZR87_RS15200	0.61	+0.2
3,204,815	-		ABZR87_RS15200	0.61	-0.2
3,204,815	-		ABZR87_RS15200	0.61	-1.2
3,204,815	-		ABZR87_RS15200	0.61	-0.7
3,204,815	-		ABZR87_RS15200	0.61	-1.4
3,204,815	-		ABZR87_RS15200	0.61	-0.1
3,204,815	-		ABZR87_RS15200	0.61	-1.9
3,204,815	-		ABZR87_RS15200	0.61	+0.4
3,204,815	-		ABZR87_RS15200	0.61	-0.3
3,204,818	+		ABZR87_RS15200	0.61	+1.5
3,204,848	+		ABZR87_RS15200	0.68	+0.2
3,204,848	+		ABZR87_RS15200	0.68	-0.6
3,204,848	+		ABZR87_RS15200	0.68	+0.8
3,204,849	-		ABZR87_RS15200	0.69	+1.0
3,204,849	-		ABZR87_RS15200	0.69	+0.2
3,204,849	-		ABZR87_RS15200	0.69	+0.0
3,204,849	-		ABZR87_RS15200	0.69	+1.2
3,204,870	-		ABZR87_RS15200	0.73	+0.8
3,204,984	+				+0.6
3,204,985	-				-0.1
3,205,028	+				-2.8
3,205,028	+				-0.8
3,205,028	+				+0.8
3,205,028	+				+0.5
3,205,053	+				+0.7
3,205,053	+				-0.6
3,205,053	+				+0.9
3,205,053	+				-0.0
3,205,191	+		ABZR87_RS15205	0.12	+1.3
3,205,192	-		ABZR87_RS15205	0.12	+1.6
3,205,192	-		ABZR87_RS15205	0.12	-1.1
3,205,200	+		ABZR87_RS15205	0.13	+0.8
3,205,201	-		ABZR87_RS15205	0.13	-0.2
3,205,201	-		ABZR87_RS15205	0.13	-0.0
3,205,201	-		ABZR87_RS15205	0.13	-0.8
3,205,239	-		ABZR87_RS15205	0.17	-0.1
3,205,256	+		ABZR87_RS15205	0.19	+1.0
3,205,256	+		ABZR87_RS15205	0.19	-1.3
3,205,257	-		ABZR87_RS15205	0.19	-0.3
3,205,257	-		ABZR87_RS15205	0.19	-1.2
3,205,257	-		ABZR87_RS15205	0.19	-0.9
3,205,257	-		ABZR87_RS15205	0.19	-1.0
3,205,257	-		ABZR87_RS15205	0.19	+0.0
3,205,329	+		ABZR87_RS15205	0.27	-0.3
3,205,329	+		ABZR87_RS15205	0.27	+0.5
3,205,329	+		ABZR87_RS15205	0.27	-0.6
3,205,330	-		ABZR87_RS15205	0.27	+0.4
3,205,795	-		ABZR87_RS15205	0.78	-1.1
3,205,795	-		ABZR87_RS15205	0.78	-0.0
3,205,795	-		ABZR87_RS15205	0.78	+0.3
3,206,029	+				+0.1
3,206,029	+				+0.1
3,206,031	+				+2.0
3,206,032	-				-1.7
3,206,032	-				+0.5
3,206,032	-				-0.4
3,206,032	-				-1.4
3,206,033	+				+1.2
3,206,033	+				+0.5
3,206,034	-				-0.4
3,206,034	-				-1.3
3,206,034	-				-1.4
3,206,034	-				-1.0
3,206,034	-				-0.2
3,206,052	+				+0.1
3,206,052	+				-0.0
3,206,053	-				+0.9
3,206,053	-				-1.2
3,206,053	-				-0.2
3,206,054	+				-0.3
3,206,054	+				+0.8
3,206,054	+				+1.6
3,206,055	-				-0.8
3,206,062	+				+1.1
3,206,063	-				+0.8
3,206,063	-				-1.1
3,206,143	+				-0.3
3,206,143	+				+0.0
3,206,144	-				-0.9
3,206,286	+		ABZR87_RS15210	0.16	+2.6
3,206,333	+		ABZR87_RS15210	0.22	-1.2
3,206,333	+		ABZR87_RS15210	0.22	+2.8
3,206,333	+		ABZR87_RS15210	0.22	-1.0
3,206,333	+		ABZR87_RS15210	0.22	+0.7
3,206,333	+		ABZR87_RS15210	0.22	-1.3
3,206,333	+		ABZR87_RS15210	0.22	-2.1
3,206,334	-		ABZR87_RS15210	0.22	-1.1
3,206,334	-		ABZR87_RS15210	0.22	-1.6
3,206,334	-		ABZR87_RS15210	0.22	-0.9
3,206,334	-		ABZR87_RS15210	0.22	-1.0
3,206,367	-		ABZR87_RS15210	0.26	-1.2
3,206,367	-		ABZR87_RS15210	0.26	-0.6
3,206,417	+		ABZR87_RS15210	0.32	-0.4
3,206,417	+		ABZR87_RS15210	0.32	+0.7
3,206,418	-		ABZR87_RS15210	0.32	+0.5
3,206,493	+		ABZR87_RS15210	0.41	-0.8
3,206,494	-		ABZR87_RS15210	0.41	-1.7
3,206,598	+		ABZR87_RS15210	0.53	-0.2
3,206,598	+		ABZR87_RS15210	0.53	-2.4
3,206,598	+		ABZR87_RS15210	0.53	+0.5
3,206,599	-		ABZR87_RS15210	0.53	-0.5
3,206,599	-		ABZR87_RS15210	0.53	-0.9
3,206,599	-		ABZR87_RS15210	0.53	+0.3
3,206,599	-		ABZR87_RS15210	0.53	-0.0
3,206,599	-		ABZR87_RS15210	0.53	-0.5
3,206,599	-		ABZR87_RS15210	0.53	-0.2
3,206,599	-		ABZR87_RS15210	0.53	+1.1
3,206,599	-		ABZR87_RS15210	0.53	-1.2
3,206,612	+		ABZR87_RS15210	0.55	-1.5
3,206,613	-		ABZR87_RS15210	0.55	+0.8
3,206,613	-		ABZR87_RS15210	0.55	-0.6
3,206,663	+		ABZR87_RS15210	0.61	-0.3
3,206,802	-		ABZR87_RS15210	0.78	+0.1
3,206,874	+		ABZR87_RS15210	0.86	+0.3
3,206,874	+		ABZR87_RS15210	0.86	-0.8
3,206,874	+		ABZR87_RS15210	0.86	-1.8
3,206,874	+		ABZR87_RS15210	0.86	-1.1
3,206,874	+		ABZR87_RS15210	0.86	+0.4
3,206,874	+		ABZR87_RS15210	0.86	-0.2
3,206,875	-		ABZR87_RS15210	0.87	+1.0
3,206,875	-		ABZR87_RS15210	0.87	-0.1
3,206,963	+				-1.3