Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_431

Experiment: Benzethonium chloride 0.0125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt Pf1N1B4_431 - hypothetical protein, at 504,126 to 505,139 _431 Position (kb) 504 505 506Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 503.150 kb on + strandat 503.150 kb on + strandat 503.226 kb on - strandat 503.272 kb on - strandat 503.290 kb on + strandat 503.291 kb on - strandat 503.349 kb on + strandat 503.351 kb on + strandat 503.351 kb on + strandat 503.351 kb on + strandat 503.352 kb on - strandat 503.352 kb on - strandat 503.379 kb on + strandat 503.379 kb on + strandat 503.380 kb on - strandat 503.380 kb on - strandat 503.380 kb on - strandat 503.448 kb on + strandat 503.448 kb on + strandat 503.449 kb on - strandat 503.453 kb on + strandat 503.472 kb on + strandat 503.472 kb on + strandat 503.474 kb on + strandat 503.474 kb on + strandat 503.474 kb on + strandat 503.474 kb on + strandat 503.605 kb on + strandat 503.605 kb on + strandat 503.605 kb on + strandat 503.606 kb on - strandat 503.606 kb on - strandat 503.606 kb on - strandat 503.607 kb on - strandat 503.661 kb on + strandat 503.694 kb on - strandat 503.841 kb on - strandat 503.841 kb on - strandat 503.841 kb on - strandat 503.851 kb on - strandat 503.881 kb on - strandat 503.920 kb on + strandat 503.920 kb on + strandat 503.920 kb on + strandat 503.921 kb on - strandat 503.921 kb on - strandat 503.921 kb on - strandat 503.921 kb on - strandat 503.921 kb on - strandat 503.994 kb on + strandat 503.994 kb on + strandat 503.994 kb on + strandat 503.994 kb on + strandat 503.994 kb on + strandat 503.995 kb on - strandat 503.995 kb on - strandat 503.995 kb on - strandat 503.995 kb on - strandat 503.995 kb on - strandat 503.995 kb on - strandat 504.000 kb on + strandat 504.127 kb on + strandat 504.128 kb on - strandat 504.128 kb on - strandat 504.178 kb on + strandat 504.225 kb on + strandat 504.226 kb on - strandat 504.262 kb on - strand, within Pf1N1B4_431at 504.288 kb on - strand, within Pf1N1B4_431at 504.448 kb on - strand, within Pf1N1B4_431at 504.460 kb on - strand, within Pf1N1B4_431at 504.527 kb on - strand, within Pf1N1B4_431at 504.723 kb on - strand, within Pf1N1B4_431at 504.728 kb on - strand, within Pf1N1B4_431at 504.818 kb on + strand, within Pf1N1B4_431at 504.823 kb on + strand, within Pf1N1B4_431at 504.855 kb on + strand, within Pf1N1B4_431at 504.887 kb on - strand, within Pf1N1B4_431at 504.911 kb on + strand, within Pf1N1B4_431at 504.951 kb on + strand, within Pf1N1B4_431at 504.951 kb on + strand, within Pf1N1B4_431at 504.951 kb on + strand, within Pf1N1B4_431at 504.952 kb on - strand, within Pf1N1B4_431at 504.955 kb on + strand, within Pf1N1B4_431at 505.053 kb on - strandat 505.177 kb on - strandat 505.184 kb on - strandat 505.251 kb on - strandat 505.268 kb on + strandat 505.269 kb on - strandat 505.272 kb on + strandat 505.282 kb on + strandat 505.282 kb on + strandat 505.282 kb on + strandat 505.283 kb on - strandat 505.283 kb on - strandat 505.283 kb on - strandat 505.283 kb on - strandat 505.613 kb on - strandat 505.613 kb on - strandat 505.680 kb on + strandat 505.681 kb on - strandat 505.738 kb on + strandat 505.739 kb on - strandat 505.751 kb on - strandat 505.804 kb on + strandat 505.895 kb on + strandat 505.896 kb on - strandat 505.896 kb on - strandat 505.896 kb on - strandat 505.956 kb on + strandat 505.956 kb on + strandat 505.957 kb on - strandat 505.957 kb on - strandat 506.012 kb on + strandat 506.012 kb on + strandat 506.059 kb on + strandat 506.059 kb on + strandat 506.060 kb on - strandat 506.061 kb on + strandat 506.061 kb on + strandat 506.061 kb on + strandat 506.061 kb on + strandat 506.062 kb on - strandat 506.095 kb on + strandat 506.095 kb on + strandat 506.095 kb on + strandat 506.095 kb on + strandat 506.095 kb on + strandat 506.096 kb on - strandat 506.096 kb on - strandat 506.101 kb on + strandat 506.101 kb on + strandat 506.139 kb on + strandat 506.139 kb on + strandat 506.139 kb on + strandat 506.139 kb on + strandat 506.139 kb on + strandat 506.139 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM
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503,150 + -0.2
503,150 + -0.2
503,226 - +0.8
503,272 - +2.3
503,290 + -0.5
503,291 - +1.0
503,349 + -0.5
503,351 + -2.1
503,351 + +0.9
503,351 + +1.3
503,352 - -1.3
503,352 - -1.3
503,379 + -1.0
503,379 + -1.2
503,380 - +1.5
503,380 - +1.0
503,380 - -0.1
503,448 + +0.5
503,448 + -1.0
503,449 - +1.0
503,453 + +1.9
503,472 + -0.8
503,472 + -0.7
503,474 + -0.9
503,474 + +2.0
503,474 + -1.5
503,474 + -1.5
503,605 + +0.9
503,605 + -0.5
503,605 + -2.7
503,606 - +0.5
503,606 - +0.4
503,606 - +0.7
503,607 - +0.6
503,661 + -0.0
503,694 - +1.4
503,841 - -2.0
503,841 - -0.1
503,841 - -1.0
503,851 - -1.3
503,881 - +1.0
503,920 + -0.5
503,920 + +0.0
503,920 + -1.0
503,921 - -1.8
503,921 - -0.5
503,921 - -0.3
503,921 - +1.4
503,921 - +0.5
503,994 + -1.6
503,994 + +1.5
503,994 + -1.5
503,994 + -3.0
503,994 + +0.2
503,995 - -1.3
503,995 - +1.0
503,995 - -0.1
503,995 - -1.0
503,995 - +0.2
503,995 - -1.0
504,000 + +0.0
504,127 + -1.8
504,128 - -0.5
504,128 - -0.5
504,178 + -1.0
504,225 + -1.1
504,226 - +1.5
504,262 - Pf1N1B4_431 0.13 -2.3
504,288 - Pf1N1B4_431 0.16 +0.0
504,448 - Pf1N1B4_431 0.32 +0.0
504,460 - Pf1N1B4_431 0.33 +0.0
504,527 - Pf1N1B4_431 0.40 -1.5
504,723 - Pf1N1B4_431 0.59 -0.2
504,728 - Pf1N1B4_431 0.59 -1.8
504,818 + Pf1N1B4_431 0.68 -1.1
504,823 + Pf1N1B4_431 0.69 -0.7
504,855 + Pf1N1B4_431 0.72 -0.6
504,887 - Pf1N1B4_431 0.75 -1.0
504,911 + Pf1N1B4_431 0.77 -1.0
504,951 + Pf1N1B4_431 0.81 -0.5
504,951 + Pf1N1B4_431 0.81 -1.0
504,951 + Pf1N1B4_431 0.81 -2.1
504,952 - Pf1N1B4_431 0.81 -1.3
504,955 + Pf1N1B4_431 0.82 -1.6
505,053 - +2.0
505,177 - +0.7
505,184 - -0.3
505,251 - +1.5
505,268 + -0.5
505,269 - -0.4
505,272 + -1.3
505,282 + +1.7
505,282 + -0.5
505,282 + +0.3
505,283 - +0.5
505,283 - +0.9
505,283 - -0.2
505,283 - -0.5
505,613 - -0.4
505,613 - -0.5
505,680 + -0.5
505,681 - -1.8
505,738 + -2.3
505,739 - +0.0
505,751 - -0.5
505,804 + -1.5
505,895 + +1.0
505,896 - -1.4
505,896 - -1.0
505,896 - -1.8
505,956 + -1.8
505,956 + -0.3
505,957 - -0.5
505,957 - -1.0
506,012 + -1.0
506,012 + +0.6
506,059 + +0.7
506,059 + -0.5
506,060 - -2.4
506,061 + -0.5
506,061 + +1.6
506,061 + -0.1
506,061 + -0.3
506,062 - -0.5
506,095 + +1.5
506,095 + +0.4
506,095 + +0.0
506,095 + -1.5
506,095 + -1.0
506,096 - -1.5
506,096 - +0.2
506,101 + -1.5
506,101 + +0.1
506,139 + +0.6
506,139 + -1.5
506,139 + +1.3
506,139 + -0.7
506,139 + -2.9
506,139 + -2.0

Or see this region's nucleotide sequence