Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02955

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
3,113,407	+				+0.0
3,113,428	+				-0.6
3,113,451	+				+0.2
3,113,451	+				-1.2
3,113,451	+				-1.1
3,113,459	-				-0.4
3,113,459	-				+0.0
3,113,465	-				+0.2
3,113,501	-				+1.6
3,113,534	-				+0.4
3,113,534	-				+0.5
3,113,583	-				+0.4
3,113,649	+		CCNA_02954	0.12	+1.1
3,113,659	-		CCNA_02954	0.13	+0.2
3,113,659	-		CCNA_02954	0.13	-0.5
3,113,675	+		CCNA_02954	0.15	+0.8
3,113,675	+		CCNA_02954	0.15	-1.7
3,113,696	+		CCNA_02954	0.17	+0.1
3,113,706	-		CCNA_02954	0.19	-1.2
3,113,714	-		CCNA_02954	0.20	+0.8
3,113,754	+		CCNA_02954	0.24	-0.6
3,113,759	+		CCNA_02954	0.25	+0.1
3,113,834	+		CCNA_02954	0.34	-0.4
3,113,872	+		CCNA_02954	0.38	-1.0
3,113,878	+		CCNA_02954	0.39	-0.2
3,113,891	+		CCNA_02954	0.40	+0.1
3,113,891	+		CCNA_02954	0.40	+0.2
3,113,891	+		CCNA_02954	0.40	+2.7
3,113,909	-		CCNA_02954	0.42	-0.7
3,113,924	-		CCNA_02954	0.44	+0.7
3,113,952	-		CCNA_02954	0.48	+2.2
3,114,009	+		CCNA_02954	0.54	-0.4
3,114,014	+		CCNA_02954	0.55	-0.7
3,114,014	+		CCNA_02954	0.55	-0.6
3,114,028	+		CCNA_02954	0.56	-0.0
3,114,120	+		CCNA_02954	0.67	+1.2
3,114,153	-		CCNA_02954	0.71	-2.0
3,114,205	+		CCNA_02954	0.77	-0.7
3,114,213	-		CCNA_02954	0.78	+0.9
3,114,213	-		CCNA_02954	0.78	+0.1
3,114,278	-		CCNA_02954	0.86	+1.9
3,114,279	-		CCNA_02954	0.86	-0.0
3,114,305	+		CCNA_02954	0.89	-0.4
3,114,309	-		CCNA_02954	0.89	+1.3
3,114,313	-				+1.3
3,114,337	+				-1.7
3,114,368	+				+0.9
3,114,390	-				+1.4
3,114,392	+				-1.2
3,114,395	-				-0.3
3,114,401	-				-1.1
3,114,507	+		CCNA_02955	0.14	+1.4
3,114,571	+		CCNA_02955	0.22	-0.2
3,114,616	-		CCNA_02955	0.28	+0.9
3,114,631	-		CCNA_02955	0.30	+1.2
3,114,665	-		CCNA_02955	0.34	+1.8
3,114,683	-		CCNA_02955	0.37	+0.3
3,114,767	+		CCNA_02955	0.47	-0.0
3,114,767	+		CCNA_02955	0.47	+0.2
3,114,775	-		CCNA_02955	0.48	-1.4
3,114,775	-		CCNA_02955	0.48	+0.4
3,114,775	-		CCNA_02955	0.48	+0.1
3,114,775	-		CCNA_02955	0.48	+1.1
3,114,847	+		CCNA_02955	0.58	+1.1
3,114,847	+		CCNA_02955	0.58	+0.0
3,114,855	-		CCNA_02955	0.59	+0.3
3,114,857	+		CCNA_02955	0.59	+0.1
3,114,857	+		CCNA_02955	0.59	+1.8
3,114,888	+		CCNA_02955	0.63	+1.5
3,114,895	-		CCNA_02955	0.64	-1.9
3,114,933	-		CCNA_02955	0.69	+0.3
3,114,940	+		CCNA_02955	0.70	+2.4
3,114,940	+		CCNA_02955	0.70	+0.2
3,114,964	-		CCNA_02955	0.73	+0.7
3,114,964	-		CCNA_02955	0.73	+1.0
3,114,965	+		CCNA_02955	0.73	+3.2
3,114,971	+		CCNA_02955	0.74	-0.8
3,114,971	+		CCNA_02955	0.74	-1.7
3,114,971	+		CCNA_02955	0.74	+1.0
3,114,971	+		CCNA_02955	0.74	-0.4
3,114,971	+		CCNA_02955	0.74	-0.2
3,114,971	+		CCNA_02955	0.74	-0.6
3,114,971	+		CCNA_02955	0.74	-0.9
3,114,971	+		CCNA_02955	0.74	+0.6
3,114,971	+		CCNA_02955	0.74	-0.6
3,114,971	+		CCNA_02955	0.74	-0.7
3,114,971	+		CCNA_02955	0.74	-1.5
3,114,979	-		CCNA_02955	0.75	+1.5
3,114,979	-		CCNA_02955	0.75	-0.3
3,114,979	-		CCNA_02955	0.75	+0.5
3,114,979	-		CCNA_02955	0.75	+0.8
3,114,979	-		CCNA_02955	0.75	+0.1
3,114,979	-		CCNA_02955	0.75	+0.8
3,114,979	-		CCNA_02955	0.75	+1.8
3,114,979	-		CCNA_02955	0.75	-0.0
3,114,979	-		CCNA_02955	0.75	+0.6
3,114,979	-		CCNA_02955	0.75	-0.4
3,114,979	-		CCNA_02955	0.75	+1.1
3,114,979	-		CCNA_02955	0.75	+0.3
3,114,979	-		CCNA_02955	0.75	+0.4
3,114,979	-		CCNA_02955	0.75	+0.3
3,114,979	-		CCNA_02955	0.75	+0.6
3,114,979	-		CCNA_02955	0.75	+1.1
3,114,979	-		CCNA_02955	0.75	+0.3
3,114,979	-		CCNA_02955	0.75	+1.1
3,114,979	-		CCNA_02955	0.75	+0.7
3,114,979	-		CCNA_02955	0.75	+1.3
3,115,070	-		CCNA_02955	0.87	-0.0
3,115,072	-		CCNA_02955	0.87	+0.1
3,115,113	-				+1.8
3,115,120	-				-0.3
3,115,123	-				+0.2
3,115,123	-				+2.3
3,115,149	-				+0.3
3,115,153	+				+1.7
3,115,205	+				-0.9
3,115,217	+				-0.4
3,115,218	-				-0.1
3,115,264	-		CCNA_02956	0.16	+0.8
3,115,264	-		CCNA_02956	0.16	+1.7
3,115,264	-		CCNA_02956	0.16	+1.1
3,115,264	-		CCNA_02956	0.16	-0.1
3,115,264	-		CCNA_02956	0.16	+0.5
3,115,264	-		CCNA_02956	0.16	-0.8
3,115,295	-		CCNA_02956	0.22	-0.0
3,115,313	+		CCNA_02956	0.25	-0.6
3,115,326	-		CCNA_02956	0.28	+0.8
3,115,326	-		CCNA_02956	0.28	+0.6
3,115,331	-		CCNA_02956	0.28	+0.6
3,115,331	-		CCNA_02956	0.28	+0.9
3,115,347	+		CCNA_02956	0.31	+0.2
3,115,360	-		CCNA_02956	0.34	+0.9
3,115,383	+		CCNA_02956	0.38	+0.0
3,115,434	-		CCNA_02956	0.48	-0.1
3,115,444	+		CCNA_02956	0.50	-0.1
3,115,461	+		CCNA_02956	0.53	-0.4
3,115,466	+		CCNA_02956	0.54	-0.9
3,115,469	-		CCNA_02956	0.54	+0.9
3,115,469	-		CCNA_02956	0.54	+0.3
3,115,469	-		CCNA_02956	0.54	+0.2
3,115,474	-		CCNA_02956	0.55	-1.3
3,115,474	-		CCNA_02956	0.55	-1.2
3,115,480	-		CCNA_02956	0.56	+2.4
3,115,518	+		CCNA_02956	0.63	-0.5
3,115,546	+		CCNA_02956	0.69	-0.6
3,115,554	-		CCNA_02956	0.70	-0.5
3,115,566	+		CCNA_02956	0.72	-0.2
3,115,583	+		CCNA_02956	0.75	+0.3
3,115,664	+				-0.2
3,115,664	+				-0.4
3,115,667	-				+0.6
3,115,686	-				+0.3
3,115,710	+				+0.2
3,115,710	+				-0.8
3,115,735	+		CCNA_02957	0.15	+1.2
3,115,774	-		CCNA_02957	0.26	+3.0
3,115,818	-		CCNA_02957	0.38	+2.4
3,115,858	-		CCNA_02957	0.49	+3.8
3,115,881	-		CCNA_02957	0.55	+2.8
3,115,890	-		CCNA_02957	0.58	+2.6
3,115,902	-		CCNA_02957	0.61	+2.5
3,116,010	-				+0.6
3,116,106	+				-0.2
3,116,106	+				-0.8
3,116,115	-				-1.1
3,116,146	+				+0.7