Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02550

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
2,696,999	+		CCNA_02548	0.86	-1.0
2,697,022	-		CCNA_02548	0.90	-0.7
2,697,049	+				+0.5
2,697,119	+				+1.3
2,697,172	+				+0.8
2,697,180	-		CCNA_02549	0.11	-0.1
2,697,181	-		CCNA_02549	0.11	-0.4
2,697,200	+		CCNA_02549	0.13	-1.0
2,697,208	-		CCNA_02549	0.14	-1.6
2,697,229	-		CCNA_02549	0.16	-0.0
2,697,236	+		CCNA_02549	0.17	-0.2
2,697,267	+		CCNA_02549	0.21	+0.2
2,697,267	+		CCNA_02549	0.21	+0.2
2,697,267	+		CCNA_02549	0.21	+0.9
2,697,275	-		CCNA_02549	0.21	+3.0
2,697,296	-		CCNA_02549	0.24	-0.3
2,697,303	+		CCNA_02549	0.25	+0.9
2,697,303	+		CCNA_02549	0.25	-0.1
2,697,303	+		CCNA_02549	0.25	-0.6
2,697,311	-		CCNA_02549	0.25	-0.2
2,697,311	-		CCNA_02549	0.25	+0.4
2,697,311	-		CCNA_02549	0.25	-0.0
2,697,359	+		CCNA_02549	0.31	+0.5
2,697,366	-		CCNA_02549	0.32	+1.2
2,697,409	+		CCNA_02549	0.36	+0.5
2,697,409	+		CCNA_02549	0.36	-0.1
2,697,409	+		CCNA_02549	0.36	+0.9
2,697,409	+				+1.4
2,697,419	+		CCNA_02549	0.38	+0.9
2,697,419	+		CCNA_02549	0.38	+0.8
2,697,419	+		CCNA_02549	0.38	+0.6
2,697,422	-		CCNA_02549	0.38	-1.6
2,697,427	-		CCNA_02549	0.38	-0.3
2,697,506	-		CCNA_02549	0.47	-0.1
2,697,536	+		CCNA_02549	0.51	+1.1
2,697,552	+		CCNA_02549	0.53	+0.5
2,697,565	-		CCNA_02549	0.54	+0.4
2,697,566	+		CCNA_02549	0.54	+1.8
2,697,566	+		CCNA_02549	0.54	-1.2
2,697,566	+		CCNA_02549	0.54	+1.2
2,697,566	+		CCNA_02549	0.54	+1.0
2,697,566	+		CCNA_02549	0.54	+0.8
2,697,566	+		CCNA_02549	0.54	+0.4
2,697,569	-		CCNA_02549	0.54	-0.4
2,697,569	-		CCNA_02549	0.54	-0.1
2,697,572	+		CCNA_02549	0.55	+1.3
2,697,574	-		CCNA_02549	0.55	-1.8
2,697,574	-		CCNA_02549	0.55	-0.1
2,697,574	-		CCNA_02549	0.55	-1.4
2,697,574	-		CCNA_02549	0.55	-0.2
2,697,574	-		CCNA_02549	0.55	+2.6
2,697,574	-		CCNA_02549	0.55	+0.7
2,697,574	-		CCNA_02549	0.55	-2.1
2,697,574	-		CCNA_02549	0.55	-2.2
2,697,585	-		CCNA_02549	0.56	+0.4
2,697,586	-		CCNA_02549	0.56	+0.7
2,697,615	+		CCNA_02549	0.60	+0.8
2,697,615	+		CCNA_02549	0.60	+0.5
2,697,677	-		CCNA_02549	0.67	+0.1
2,697,717	+		CCNA_02549	0.71	+0.4
2,697,722	+		CCNA_02549	0.72	+1.2
2,697,730	-		CCNA_02549	0.73	-2.4
2,697,740	-		CCNA_02549	0.74	+0.0
2,697,764	+				+1.5
2,697,766	-		CCNA_02549	0.77	-0.1
2,697,771	+		CCNA_02549	0.77	-0.1
2,697,772	-		CCNA_02549	0.77	-1.2
2,697,807	+		CCNA_02549	0.81	+2.3
2,697,815	-		CCNA_02549	0.82	+0.5
2,697,838	+		CCNA_02549	0.85	+0.3
2,697,842	+		CCNA_02549	0.85	-0.2
2,697,884	-		CCNA_02549	0.90	-0.9
2,697,905	+				+0.9
2,697,905	+				+1.1
2,697,905	+				+1.5
2,697,912	+				-0.0
2,697,912	+				+0.8
2,697,913	-				-0.2
2,697,920	-				+0.5
2,697,926	+				+0.3
2,697,933	+				+2.8
2,697,933	+				+0.1
2,697,936	-				+0.1
2,697,936	-				-0.8
2,697,947	+				+1.4
2,697,948	+				+0.9
2,697,948	+				+1.0
2,697,976	-				+0.7
2,697,976	-				-0.5
2,698,034	-				-1.0
2,698,036	+				-0.0
2,698,062	+				+0.9
2,698,074	-				-0.8
2,698,108	-				+1.7
2,698,110	-		CCNA_02550	0.10	-1.3
2,698,186	-		CCNA_02550	0.16	+0.8
2,698,188	+		CCNA_02550	0.16	-0.2
2,698,196	-		CCNA_02550	0.17	-0.9
2,698,196	-		CCNA_02550	0.17	+0.5
2,698,210	+		CCNA_02550	0.18	+1.2
2,698,218	-		CCNA_02550	0.19	-0.6
2,698,263	-		CCNA_02550	0.22	+1.0
2,698,270	+		CCNA_02550	0.23	+0.0
2,698,320	-		CCNA_02550	0.27	-0.6
2,698,342	-		CCNA_02550	0.29	-1.4
2,698,343	-		CCNA_02550	0.29	+0.1
2,698,345	+		CCNA_02550	0.29	-1.2
2,698,348	+		CCNA_02550	0.29	-1.6
2,698,348	+		CCNA_02550	0.29	-1.7
2,698,361	-		CCNA_02550	0.30	-1.4
2,698,388	-		CCNA_02550	0.32	+0.2
2,698,390	+		CCNA_02550	0.32	+0.8
2,698,390	+		CCNA_02550	0.32	+2.8
2,698,390	+		CCNA_02550	0.32	-2.0
2,698,390	+		CCNA_02550	0.32	+0.5
2,698,398	-		CCNA_02550	0.33	-1.3
2,698,398	-		CCNA_02550	0.33	-2.3
2,698,398	-		CCNA_02550	0.33	+1.0
2,698,405	+		CCNA_02550	0.34	-0.6
2,698,428	+		CCNA_02550	0.35	-0.1
2,698,436	-		CCNA_02550	0.36	+0.7
2,698,436	-		CCNA_02550	0.36	-0.7
2,698,453	-		CCNA_02550	0.37	-0.8
2,698,458	-		CCNA_02550	0.38	-1.0
2,698,487	-		CCNA_02550	0.40	+0.1
2,698,541	+		CCNA_02550	0.44	-0.2
2,698,544	-		CCNA_02550	0.45	-1.5
2,698,554	-		CCNA_02550	0.45	-0.6
2,698,561	-		CCNA_02550	0.46	+0.2
2,698,612	+		CCNA_02550	0.50	-1.0
2,698,647	+		CCNA_02550	0.53	-1.2
2,698,647	-		CCNA_02550	0.53	+1.6
2,698,657	+		CCNA_02550	0.54	-0.9
2,698,667	+		CCNA_02550	0.54	-1.7
2,698,703	-		CCNA_02550	0.57	-0.6
2,698,721	+		CCNA_02550	0.59	-1.9
2,698,763	+		CCNA_02550	0.62	-0.9
2,698,771	-		CCNA_02550	0.63	-1.1
2,698,776	-		CCNA_02550	0.63	-1.7
2,698,820	-		CCNA_02550	0.67	+0.5
2,698,863	-		CCNA_02550	0.70	-1.2
2,698,996	+		CCNA_02550	0.81	+0.8
2,698,996	+		CCNA_02550	0.81	-0.1
2,698,996	+		CCNA_02550	0.81	+0.3
2,699,004	-				+1.4
2,699,004	-		CCNA_02550	0.81	+0.0
2,699,014	-		CCNA_02550	0.82	-1.2
2,699,014	-		CCNA_02550	0.82	-0.6
2,699,015	-		CCNA_02550	0.82	-1.3
2,699,017	+		CCNA_02550	0.82	-0.5
2,699,017	+		CCNA_02550	0.82	-0.6
2,699,025	-		CCNA_02550	0.83	+0.0
2,699,051	-		CCNA_02550	0.85	+0.5
2,699,058	+		CCNA_02550	0.86	-0.9
2,699,058	+		CCNA_02550	0.86	+0.0
2,699,060	+		CCNA_02550	0.86	-1.6
2,699,066	-		CCNA_02550	0.86	+0.0
2,699,069	+		CCNA_02550	0.86	-0.6
2,699,087	-		CCNA_02550	0.88	+0.1
2,699,092	-		CCNA_02550	0.88	-0.8
2,699,092	-		CCNA_02550	0.88	-0.3
2,699,150	+				-0.6
2,699,151	-				+0.3
2,699,206	+				-0.3
2,699,246	+				+0.1
2,699,254	-				+0.0
2,699,254	-				-0.6
2,699,254	-				+0.8
2,699,254	-				-1.1
2,699,254	-				-0.9
2,699,261	+		CCNA_02551	0.13	-1.5
2,699,269	-				+2.4
2,699,282	-		CCNA_02551	0.24	+0.3
2,699,309	+		CCNA_02551	0.37	+1.3
2,699,309	+		CCNA_02551	0.37	+2.1
2,699,309	+		CCNA_02551	0.37	+1.3
2,699,369	+		CCNA_02551	0.68	+1.4
2,699,374	+		CCNA_02551	0.71	+0.8
2,699,382	-		CCNA_02551	0.75	+0.0
2,699,382	-		CCNA_02551	0.75	-0.6
2,699,384	+		CCNA_02551	0.76	+0.2
2,699,385	+		CCNA_02551	0.76	+0.5
2,699,393	-		CCNA_02551	0.81	+0.4
2,699,442	+				+0.8
2,699,442	+				+1.4
2,699,455	-				-0.3
2,699,491	+		CCNA_02552	0.10	+0.8
2,699,491	+		CCNA_02552	0.10	+0.2
2,699,499	-		CCNA_02552	0.13	-0.9
2,699,499	-		CCNA_02552	0.13	-1.1
2,699,671	+		CCNA_02552	0.65	+1.4
2,699,696	-		CCNA_02552	0.72	+1.0
2,699,711	+		CCNA_02552	0.77	+0.2
2,699,762	+				+1.0
2,699,780	+				+1.1
2,699,780	+				+0.7
2,699,788	-				+0.0
2,699,788	-				-1.2
2,699,794	+				+2.1
2,699,799	+				+1.6
2,699,819	+				+0.0
2,699,819	+				+0.8
2,699,819	+				+0.9
2,699,819	+				+0.1
2,699,827	-				-1.6
2,699,827	-				-0.5
2,699,828	+				+0.4
2,699,828	+				+0.8
2,699,829	+				-0.1
2,699,829	+				+0.7
2,699,829	+				+1.2
2,699,830	+				-0.2
2,699,838	-				-0.7
2,699,860	-				+0.9
2,699,862	+				+0.4
2,699,891	+				+0.7
2,699,937	-				-0.3
2,699,965	+				+0.4
2,699,975	-				-2.4
2,699,982	-				+2.0
2,699,998	+				+0.9
2,700,148	+		CCNA_02553	0.15	+0.6
2,700,183	+		CCNA_02553	0.16	+1.0
2,700,191	-		CCNA_02553	0.17	-0.3
2,700,195	+		CCNA_02553	0.17	+0.9
2,700,203	-		CCNA_02553	0.17	-1.0