Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01371

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
1,485,424	+		CCNA_01369	0.62	+0.6
1,485,457	-		CCNA_01369	0.65	-1.9
1,485,480	-		CCNA_01369	0.67	-1.1
1,485,482	+		CCNA_01369	0.67	+1.2
1,485,482	+		CCNA_01369	0.67	+0.6
1,485,482	+		CCNA_01369	0.67	+0.8
1,485,487	+		CCNA_01369	0.68	+0.6
1,485,487	+		CCNA_01369	0.68	+0.5
1,485,487	+		CCNA_01369	0.68	+0.1
1,485,487	+		CCNA_01369	0.68	-0.3
1,485,490	-		CCNA_01369	0.68	-0.8
1,485,490	-		CCNA_01369	0.68	-1.6
1,485,492	+		CCNA_01369	0.68	+1.7
1,485,500	-		CCNA_01369	0.69	+1.6
1,485,500	-		CCNA_01369	0.69	+1.5
1,485,511	+		CCNA_01369	0.70	+3.6
1,485,540	-		CCNA_01369	0.72	-1.3
1,485,542	+		CCNA_01369	0.73	+0.2
1,485,610	+		CCNA_01369	0.79	-0.0
1,485,617	+		CCNA_01369	0.79	+0.8
1,485,620	+		CCNA_01369	0.79	+0.2
1,485,623	-		CCNA_01369	0.80	+0.2
1,485,625	-		CCNA_01369	0.80	+0.1
1,485,640	+		CCNA_01369	0.81	+3.0
1,485,640	+		CCNA_01369	0.81	+0.4
1,485,648	-		CCNA_01369	0.82	+0.4
1,485,657	+		CCNA_01369	0.83	+1.3
1,485,778	+				+0.8
1,485,780	+				+1.2
1,485,785	+				+0.5
1,485,790	+				+1.2
1,485,800	+				+0.9
1,485,808	-				-0.3
1,485,808	-				-2.7
1,485,848	+				+1.2
1,485,855	+				+0.6
1,485,874	+				+1.4
1,485,934	+				-1.9
1,486,039	+				-1.7
1,486,113	+				+0.4
1,486,113	+				-0.2
1,486,113	+				+0.1
1,486,169	+				+0.6
1,486,169	+				-0.6
1,486,197	+				+2.8
1,486,251	+		CCNA_03948	0.30	-0.1
1,486,300	+		CCNA_03948	0.66	+1.4
1,486,300	+		CCNA_03948	0.66	-0.1
1,486,369	+				-0.1
1,486,382	-				+0.2
1,486,385	+				-0.8
1,486,393	-				+1.5
1,486,398	-				+1.7
1,486,400	-				+2.0
1,486,400	-				+1.1
1,486,400	-				+1.4
1,486,425	-				+1.4
1,486,459	-		CCNA_01371	0.12	+2.4
1,486,474	-		CCNA_01371	0.17	+2.0
1,486,491	+		CCNA_01371	0.23	-0.5
1,486,576	+		CCNA_01371	0.50	+1.6
1,486,577	-		CCNA_01371	0.50	+1.2
1,486,582	-		CCNA_01371	0.52	+0.8
1,486,589	+		CCNA_01371	0.54	-1.5
1,486,589	+		CCNA_01371	0.54	+0.8
1,486,597	-		CCNA_01371	0.57	+2.1
1,486,643	-		CCNA_01371	0.72	+0.3
1,486,705	-				+1.0
1,486,729	+				-0.6
1,486,859	-				-1.1
1,486,896	-		CCNA_01372	0.11	+0.1
1,486,896	-		CCNA_01372	0.11	-0.4
1,486,928	-		CCNA_01372	0.16	-0.9
1,486,957	+		CCNA_01372	0.21	-1.3
1,486,984	+		CCNA_01372	0.25	-0.3
1,486,992	-		CCNA_01372	0.26	-0.2
1,487,120	-		CCNA_01372	0.47	+0.1
1,487,163	-		CCNA_01372	0.55	+1.3
1,487,180	+		CCNA_01372	0.57	-1.4
1,487,229	-		CCNA_01372	0.65	-0.7
1,487,276	+		CCNA_01372	0.73	-0.6
1,487,288	-		CCNA_01372	0.75	-0.3
1,487,303	+		CCNA_01372	0.78	-0.4
1,487,311	-		CCNA_01372	0.79	+0.3
1,487,321	-		CCNA_01372	0.80	-0.2
1,487,322	-		CCNA_01372	0.81	+0.8
1,487,322	-		CCNA_01372	0.81	+1.4
1,487,322	-		CCNA_01372	0.81	-0.2
1,487,324	+		CCNA_01372	0.81	-2.0
1,487,327	-		CCNA_01372	0.81	+1.9
1,487,373	+		CCNA_01372	0.89	-1.2
1,487,382	+				+0.1
1,487,411	+				-0.6
1,487,419	-				+1.6
1,487,419	-				+1.0
1,487,428	-				-0.2
1,487,429	-				-0.8
1,487,430	+				+0.2
1,487,438	-				-0.5
1,487,451	+				-0.2
1,487,451	+				-1.7
1,487,457	-				+2.0
1,487,458	+				+0.4
1,487,458	+				-1.4
1,487,466	-				+2.2
1,487,466	-				-0.0
1,487,542	-				+0.2
1,487,574	+				-0.9
1,487,597	+		CCNA_01373	0.11	-0.6
1,487,640	+		CCNA_01373	0.16	-0.5
1,487,700	-		CCNA_01373	0.23	-1.4