Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02260 and CA265_RS02265 are separated by 46 nucleotides CA265_RS02265 and CA265_RS02270 are separated by 102 nucleotides CA265_RS02270 and CA265_RS02275 are separated by 203 nucleotides CA265_RS02275 and CA265_RS02280 are separated by 209 nucleotides
CA265_RS02260: CA265_RS02260 - GNAT family N-acetyltransferase, at 568,859 to 569,389
_RS02260
CA265_RS02265: CA265_RS02265 - damage-inducible protein DinB, at 569,436 to 569,936
_RS02265
CA265_RS02270: CA265_RS02270 - DUF4199 domain-containing protein, at 570,039 to 570,587
_RS02270
CA265_RS02275: CA265_RS02275 - helix-turn-helix transcriptional regulator, at 570,791 to 571,261
_RS02275
CA265_RS02280: CA265_RS02280 - hypothetical protein, at 571,471 to 572,259
_RS02280
Position (kb) 570
571 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 569.054 kb on - strand, within CA265_RS02260 at 569.106 kb on + strand, within CA265_RS02260 at 569.106 kb on + strand, within CA265_RS02260 at 569.120 kb on - strand, within CA265_RS02260 at 569.167 kb on + strand, within CA265_RS02260 at 569.168 kb on - strand, within CA265_RS02260 at 569.248 kb on + strand, within CA265_RS02260 at 569.260 kb on + strand, within CA265_RS02260 at 569.287 kb on - strand, within CA265_RS02260 at 569.406 kb on - strand at 569.467 kb on + strand at 569.468 kb on - strand at 569.469 kb on + strand at 569.469 kb on + strand at 569.469 kb on + strand at 569.469 kb on + strand at 569.470 kb on - strand at 569.471 kb on + strand at 569.472 kb on - strand at 569.504 kb on - strand, within CA265_RS02265 at 569.544 kb on + strand, within CA265_RS02265 at 569.545 kb on - strand, within CA265_RS02265 at 569.693 kb on + strand, within CA265_RS02265 at 569.734 kb on + strand, within CA265_RS02265 at 569.785 kb on + strand, within CA265_RS02265 at 569.820 kb on - strand, within CA265_RS02265 at 569.851 kb on - strand, within CA265_RS02265 at 569.874 kb on + strand, within CA265_RS02265 at 569.896 kb on - strand at 569.917 kb on - strand at 569.927 kb on + strand at 569.931 kb on + strand at 569.973 kb on - strand at 569.983 kb on + strand at 569.988 kb on + strand at 570.023 kb on - strand at 570.023 kb on - strand at 570.120 kb on - strand, within CA265_RS02270 at 570.271 kb on + strand, within CA265_RS02270 at 570.271 kb on + strand, within CA265_RS02270 at 570.271 kb on + strand, within CA265_RS02270 at 570.272 kb on - strand, within CA265_RS02270 at 570.272 kb on - strand, within CA265_RS02270 at 570.272 kb on - strand, within CA265_RS02270 at 570.272 kb on - strand, within CA265_RS02270 at 570.297 kb on + strand, within CA265_RS02270 at 570.298 kb on - strand, within CA265_RS02270 at 570.298 kb on - strand, within CA265_RS02270 at 570.301 kb on + strand, within CA265_RS02270 at 570.355 kb on + strand, within CA265_RS02270 at 570.356 kb on - strand, within CA265_RS02270 at 570.404 kb on - strand, within CA265_RS02270 at 570.407 kb on + strand, within CA265_RS02270 at 570.408 kb on - strand, within CA265_RS02270 at 570.459 kb on - strand, within CA265_RS02270 at 570.459 kb on - strand, within CA265_RS02270 at 570.505 kb on + strand, within CA265_RS02270 at 570.574 kb on - strand at 570.596 kb on - strand at 570.596 kb on - strand at 570.614 kb on - strand at 570.614 kb on - strand at 570.623 kb on - strand at 570.634 kb on + strand at 570.635 kb on - strand at 570.683 kb on + strand at 570.735 kb on + strand at 570.736 kb on - strand at 570.889 kb on + strand, within CA265_RS02275 at 570.905 kb on + strand, within CA265_RS02275 at 570.911 kb on + strand, within CA265_RS02275 at 570.912 kb on - strand, within CA265_RS02275 at 570.982 kb on + strand, within CA265_RS02275 at 570.983 kb on - strand, within CA265_RS02275 at 571.012 kb on + strand, within CA265_RS02275 at 571.050 kb on - strand, within CA265_RS02275 at 571.053 kb on - strand, within CA265_RS02275 at 571.060 kb on + strand, within CA265_RS02275 at 571.076 kb on - strand, within CA265_RS02275 at 571.088 kb on + strand, within CA265_RS02275 at 571.089 kb on - strand, within CA265_RS02275 at 571.090 kb on + strand, within CA265_RS02275 at 571.109 kb on - strand, within CA265_RS02275 at 571.116 kb on - strand, within CA265_RS02275 at 571.129 kb on - strand, within CA265_RS02275 at 571.150 kb on + strand, within CA265_RS02275 at 571.151 kb on - strand, within CA265_RS02275 at 571.179 kb on - strand, within CA265_RS02275 at 571.429 kb on - strand at 571.456 kb on + strand at 571.460 kb on + strand at 571.464 kb on + strand at 571.464 kb on + strand at 571.465 kb on - strand at 571.466 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 569,054 - CA265_RS02260 0.37 +0.6 569,106 + CA265_RS02260 0.47 -0.2 569,106 + CA265_RS02260 0.47 -0.3 569,120 - CA265_RS02260 0.49 +0.2 569,167 + CA265_RS02260 0.58 -0.1 569,168 - CA265_RS02260 0.58 +0.7 569,248 + CA265_RS02260 0.73 +0.5 569,260 + CA265_RS02260 0.76 +0.7 569,287 - CA265_RS02260 0.81 -2.9 569,406 - -0.1 569,467 + +0.4 569,468 - -0.1 569,469 + -0.9 569,469 + -1.1 569,469 + -0.7 569,469 + -1.0 569,470 - -0.3 569,471 + -0.2 569,472 - +0.8 569,504 - CA265_RS02265 0.14 -1.0 569,544 + CA265_RS02265 0.22 +0.7 569,545 - CA265_RS02265 0.22 -1.8 569,693 + CA265_RS02265 0.51 -0.6 569,734 + CA265_RS02265 0.59 -0.1 569,785 + CA265_RS02265 0.70 -1.1 569,820 - CA265_RS02265 0.77 +0.5 569,851 - CA265_RS02265 0.83 +0.4 569,874 + CA265_RS02265 0.87 -2.4 569,896 - -1.3 569,917 - +0.4 569,927 + +0.0 569,931 + -0.4 569,973 - +0.5 569,983 + -0.3 569,988 + -0.9 570,023 - +0.9 570,023 - -0.1 570,120 - CA265_RS02270 0.15 -0.3 570,271 + CA265_RS02270 0.42 -0.8 570,271 + CA265_RS02270 0.42 +0.3 570,271 + CA265_RS02270 0.42 -0.2 570,272 - CA265_RS02270 0.42 -0.6 570,272 - CA265_RS02270 0.42 -1.7 570,272 - CA265_RS02270 0.42 -1.5 570,272 - CA265_RS02270 0.42 -2.1 570,297 + CA265_RS02270 0.47 +0.7 570,298 - CA265_RS02270 0.47 -1.2 570,298 - CA265_RS02270 0.47 -0.4 570,301 + CA265_RS02270 0.48 -0.2 570,355 + CA265_RS02270 0.58 +0.2 570,356 - CA265_RS02270 0.58 -0.5 570,404 - CA265_RS02270 0.66 -0.2 570,407 + CA265_RS02270 0.67 -1.2 570,408 - CA265_RS02270 0.67 -0.9 570,459 - CA265_RS02270 0.77 -0.4 570,459 - CA265_RS02270 0.77 -0.7 570,505 + CA265_RS02270 0.85 -1.1 570,574 - -0.7 570,596 - -0.8 570,596 - +0.7 570,614 - +0.3 570,614 - -0.6 570,623 - +0.2 570,634 + +0.1 570,635 - +0.3 570,683 + -1.4 570,735 + -0.0 570,736 - -1.1 570,889 + CA265_RS02275 0.21 +0.7 570,905 + CA265_RS02275 0.24 +0.3 570,911 + CA265_RS02275 0.25 -0.9 570,912 - CA265_RS02275 0.26 +0.4 570,982 + CA265_RS02275 0.41 -0.8 570,983 - CA265_RS02275 0.41 +0.6 571,012 + CA265_RS02275 0.47 +0.9 571,050 - CA265_RS02275 0.55 -0.1 571,053 - CA265_RS02275 0.56 -0.2 571,060 + CA265_RS02275 0.57 +0.3 571,076 - CA265_RS02275 0.61 -1.4 571,088 + CA265_RS02275 0.63 +0.3 571,089 - CA265_RS02275 0.63 -0.2 571,090 + CA265_RS02275 0.63 +0.0 571,109 - CA265_RS02275 0.68 -0.0 571,116 - CA265_RS02275 0.69 +1.5 571,129 - CA265_RS02275 0.72 +2.1 571,150 + CA265_RS02275 0.76 +1.6 571,151 - CA265_RS02275 0.76 +0.4 571,179 - CA265_RS02275 0.82 +0.5 571,429 - -0.3 571,456 + -0.5 571,460 + +0.5 571,464 + -0.4 571,464 + -0.4 571,465 - -0.6 571,466 + -0.9
Or see this region's nucleotide sequence