Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_90

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
92,991	+				-0.2
92,995	+				+0.8
92,995	+				+0.8
92,995	+				-0.6
92,996	-				-0.1
93,008	-				-0.6
93,227	+		Pf1N1B4_89	0.27	+0.5
93,389	+		Pf1N1B4_89	0.53	+0.4
93,389	+		Pf1N1B4_89	0.53	-0.6
93,389	+		Pf1N1B4_89	0.53	+0.3
93,389	+				-1.6
93,389	+		Pf1N1B4_89	0.53	+0.8
93,389	+		Pf1N1B4_89	0.53	+0.8
93,389	+		Pf1N1B4_89	0.53	+0.2
93,389	+		Pf1N1B4_89	0.53	+0.2
93,389	+				+0.8
93,390	-		Pf1N1B4_89	0.53	-1.1
93,390	-		Pf1N1B4_89	0.53	-0.2
93,390	-		Pf1N1B4_89	0.53	+0.2
93,390	-		Pf1N1B4_89	0.53	-1.0
93,390	-		Pf1N1B4_89	0.53	-1.6
93,390	-				-0.8
93,390	-		Pf1N1B4_89	0.53	+1.4
93,390	-		Pf1N1B4_89	0.53	-0.2
93,390	-		Pf1N1B4_89	0.53	-2.4
93,390	-		Pf1N1B4_89	0.53	+0.8
93,390	-		Pf1N1B4_89	0.53	-0.8
93,390	-		Pf1N1B4_89	0.53	-0.2
93,390	-		Pf1N1B4_89	0.53	-0.2
93,390	-		Pf1N1B4_89	0.53	-0.8
93,474	+		Pf1N1B4_89	0.67	+0.4
93,475	-				+1.8
93,475	-				+1.4
93,674	+				-1.4
93,674	+				+0.1
93,674	+				-1.6
93,674	+				+1.1
93,674	+				+0.8
93,674	+				+0.8
93,675	-				+0.8
93,675	-				+2.8
93,675	-				-0.2
93,675	-				-2.1
93,682	+				-2.0
93,682	+				+1.4
93,682	+				-0.0
93,682	+				+0.2
93,683	-				-1.4
93,683	-				+0.8
93,709	+				-0.0
93,736	+				+0.1
93,750	+				-2.0
93,750	+				+0.8
93,750	+				-0.2
93,751	-				-0.3
93,760	+				+0.1
93,830	-				+0.5
93,830	-				+0.8
93,875	+				+0.8
93,876	-				+0.2
93,944	+				+0.6
93,945	-				-0.2
93,945	-				-0.8
93,945	-				+0.6
93,945	-				-0.6
94,050	+		Pf1N1B4_90	0.12	-0.8
94,051	-		Pf1N1B4_90	0.12	+0.4
94,127	+		Pf1N1B4_90	0.19	+0.7
94,128	-		Pf1N1B4_90	0.19	-0.2
94,396	+		Pf1N1B4_90	0.43	+1.5
94,396	+		Pf1N1B4_90	0.43	-0.2
94,397	-		Pf1N1B4_90	0.43	-1.5
94,457	-		Pf1N1B4_90	0.49	+0.6
94,657	-		Pf1N1B4_90	0.67	+1.6
94,846	+		Pf1N1B4_90	0.84	+0.0
94,847	-		Pf1N1B4_90	0.84	+1.1
94,847	-		Pf1N1B4_90	0.84	-0.2
94,950	-				-0.5
95,010	-				-0.7
95,056	-				-0.4
95,079	+				+0.2
95,080	-				+1.5
95,080	-				-1.6
95,116	+				+1.2
95,170	+				-0.6
95,170	+				+1.1
95,171	-				-0.2
95,171	-				+1.0
95,171	-				+1.4
95,171	-				+0.2
95,183	+				-1.6
95,183	+				-0.9
95,183	+				-1.0
95,183	+				+0.6
95,184	-				+0.8
95,184	-				+1.4
95,364	+		Pf1N1B4_91	0.11	+1.4
95,364	+		Pf1N1B4_91	0.11	-1.4
95,365	-		Pf1N1B4_91	0.11	-0.6
95,367	-				+0.8
95,408	+		Pf1N1B4_91	0.13	+0.4
95,511	+		Pf1N1B4_91	0.20	+0.8
95,565	-		Pf1N1B4_91	0.24	-1.4
95,567	+		Pf1N1B4_91	0.24	+1.4
95,745	+		Pf1N1B4_91	0.35	-0.6
95,745	+		Pf1N1B4_91	0.35	+0.3
95,746	-		Pf1N1B4_91	0.36	-0.6
95,746	-				+0.2
95,760	+		Pf1N1B4_91	0.36	+0.8
95,812	+		Pf1N1B4_91	0.40	+1.0
95,812	+		Pf1N1B4_91	0.40	+1.0
95,812	+		Pf1N1B4_91	0.40	-0.2
95,812	+		Pf1N1B4_91	0.40	-1.8
95,812	+				-1.8
95,813	-		Pf1N1B4_91	0.40	-0.0
95,813	-				+1.4
95,998	-		Pf1N1B4_91	0.52	+1.3
95,998	-		Pf1N1B4_91	0.52	-0.2