Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4855
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 5,365,847 | + | Pf1N1B4_4854 | 0.62 | +1.2 | |
| 5,365,847 | + | Pf1N1B4_4854 | 0.62 | +0.4 | |
| 5,365,904 | + | Pf1N1B4_4854 | 0.64 | -1.3 | |
| 5,366,226 | + | Pf1N1B4_4854 | 0.78 | +1.0 | |
| 5,366,283 | + | -1.9 | |||
| 5,366,322 | + | Pf1N1B4_4854 | 0.82 | -1.1 | |
| 5,366,322 | + | Pf1N1B4_4854 | 0.82 | -0.6 | |
| 5,366,339 | - | +2.0 | |||
| 5,366,391 | + | -1.9 | |||
| 5,366,391 | + | Pf1N1B4_4854 | 0.85 | -0.3 | |
| 5,366,391 | + | Pf1N1B4_4854 | 0.85 | +0.3 | |
| 5,366,391 | + | Pf1N1B4_4854 | 0.85 | -1.9 | |
| 5,366,391 | + | Pf1N1B4_4854 | 0.85 | +0.0 | |
| 5,366,392 | - | -1.1 | |||
| 5,366,935 | - | Pf1N1B4_4855 | 0.52 | -1.0 | |
| 5,366,959 | + | Pf1N1B4_4855 | 0.59 | -0.8 | |
| 5,367,084 | + | +0.7 | |||
| 5,367,110 | + | -0.0 | |||
| 5,367,110 | + | -0.1 | |||
| 5,367,111 | - | -0.7 | |||
| 5,367,271 | + | -0.0 | |||
| 5,367,272 | - | -0.4 | |||
| 5,367,752 | + | Pf1N1B4_4856 | 0.11 | -0.6 |
Or see this region's nucleotide sequence