Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4688

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
5,179,542	+				-0.5
5,179,542	+				+0.5
5,179,543	-		Pf1N1B4_4687	0.75	-0.1
5,179,624	+		Pf1N1B4_4687	0.80	+0.5
5,179,625	-		Pf1N1B4_4687	0.81	+1.1
5,179,916	+				-1.9
5,179,916	+				-0.9
5,179,916	+				-0.7
5,179,917	-				+1.5
5,179,934	-				-0.6
5,179,934	-				-1.0
5,179,957	+				+0.1
5,179,957	+				-0.9
5,179,957	+				-1.9
5,179,963	+				+0.5
5,179,963	+				+0.9
5,179,963	+				+0.1
5,180,193	+				-0.5
5,180,205	+				+2.1
5,180,478	+				+0.5
5,180,536	-				+1.5
5,180,610	+				-1.9
5,180,611	-				-2.1
5,180,705	+		Pf1N1B4_4688	0.18	+0.5
5,180,706	-		Pf1N1B4_4688	0.18	+0.1
5,180,919	+		Pf1N1B4_4688	0.40	-0.9
5,180,919	+		Pf1N1B4_4688	0.40	-2.7
5,180,919	+		Pf1N1B4_4688	0.40	+0.8
5,180,919	+		Pf1N1B4_4688	0.40	+0.2
5,180,920	-		Pf1N1B4_4688	0.40	-2.3
5,180,920	-		Pf1N1B4_4688	0.40	+0.4
5,180,920	-		Pf1N1B4_4688	0.40	+1.8
5,181,177	+		Pf1N1B4_4688	0.67	+0.5
5,181,177	+		Pf1N1B4_4688	0.67	+0.2
5,181,178	-		Pf1N1B4_4688	0.68	+0.7
5,181,178	-		Pf1N1B4_4688	0.68	+1.1
5,181,494	+				+0.2
5,181,494	+				+1.8
5,181,495	-				-1.7
5,181,495	-				+0.5
5,181,645	+		Pf1N1B4_4689	0.14	-0.2
5,181,645	+		Pf1N1B4_4689	0.14	-0.5
5,181,645	+		Pf1N1B4_4689	0.14	-0.3
5,181,646	-		Pf1N1B4_4689	0.14	-1.1
5,181,652	+		Pf1N1B4_4689	0.14	-2.3
5,181,653	-		Pf1N1B4_4689	0.15	+0.1
5,181,763	+				-2.3
5,181,766	+		Pf1N1B4_4689	0.25	+0.9
5,181,767	-		Pf1N1B4_4689	0.25	-0.1
5,181,854	-				-0.1
5,181,898	+		Pf1N1B4_4689	0.38	+0.1
5,181,899	-		Pf1N1B4_4689	0.38	+0.5
5,181,899	-		Pf1N1B4_4689	0.38	-0.5
5,181,899	-		Pf1N1B4_4689	0.38	-0.0
5,181,901	+		Pf1N1B4_4689	0.38	-0.5
5,181,901	+				-0.1
5,181,901	+		Pf1N1B4_4689	0.38	-0.9
5,181,902	-		Pf1N1B4_4689	0.38	-0.3
5,181,902	-		Pf1N1B4_4689	0.38	+0.6
5,181,902	-				-1.1
5,181,902	-		Pf1N1B4_4689	0.38	+0.5
5,181,902	-		Pf1N1B4_4689	0.38	-0.5
5,181,902	-		Pf1N1B4_4689	0.38	+0.2
5,181,902	-		Pf1N1B4_4689	0.38	-1.2
5,181,958	+		Pf1N1B4_4689	0.44	+0.1
5,181,980	-		Pf1N1B4_4689	0.46	+0.1
5,182,055	-		Pf1N1B4_4689	0.53	-0.5
5,182,174	+		Pf1N1B4_4689	0.64	-0.4
5,182,354	+		Pf1N1B4_4689	0.82	-1.9
5,182,396	+		Pf1N1B4_4689	0.86	-0.8
5,182,397	-		Pf1N1B4_4689	0.86	-0.9
5,182,397	-				+1.5
5,182,397	-		Pf1N1B4_4689	0.86	-0.1
5,182,408	+		Pf1N1B4_4689	0.87	-0.1