Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4516
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
4,977,107 | - | Pf1N1B4_4515 | 0.22 | -0.2 | |
4,977,122 | - | -1.1 | |||
4,977,262 | - | Pf1N1B4_4515 | 0.34 | -0.3 | |
4,977,607 | + | -0.5 | |||
4,977,607 | + | Pf1N1B4_4515 | 0.61 | +0.7 | |
4,977,608 | - | +0.5 | |||
4,977,608 | - | Pf1N1B4_4515 | 0.61 | +0.5 | |
4,977,641 | - | Pf1N1B4_4515 | 0.63 | +0.1 | |
4,977,898 | - | Pf1N1B4_4515 | 0.84 | -0.5 | |
4,978,022 | - | +0.5 | |||
4,978,108 | + | -0.5 | |||
4,978,109 | - | -0.1 | |||
4,978,109 | - | -1.8 | |||
4,978,225 | + | -1.0 | |||
4,978,512 | + | Pf1N1B4_4516 | 0.30 | -0.8 | |
4,978,512 | + | Pf1N1B4_4516 | 0.30 | -1.1 | |
4,978,512 | + | Pf1N1B4_4516 | 0.30 | +1.1 | |
4,978,512 | + | Pf1N1B4_4516 | 0.30 | -3.0 | |
4,978,513 | - | Pf1N1B4_4516 | 0.30 | -3.0 | |
4,978,702 | + | Pf1N1B4_4516 | 0.43 | -0.8 | |
4,978,703 | - | +1.5 | |||
4,979,493 | - | +0.1 | |||
4,979,658 | + | -0.3 | |||
4,979,659 | - | -0.5 | |||
4,979,659 | - | -1.1 | |||
4,979,721 | - | +0.5 | |||
4,980,296 | + | -0.8 | |||
4,980,369 | - | Pf1N1B4_4517 | 0.51 | +0.2 |
Or see this region's nucleotide sequence