Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3928

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
4,365,542	+		Pf1N1B4_3926	0.32	-0.9
4,365,551	+		Pf1N1B4_3926	0.33	-0.9
4,365,705	-				+1.7
4,365,754	-		Pf1N1B4_3926	0.52	-2.6
4,365,766	-		Pf1N1B4_3926	0.54	+0.7
4,366,105	+		Pf1N1B4_3926	0.85	-1.3
4,366,118	+		Pf1N1B4_3926	0.87	-0.3
4,366,118	+		Pf1N1B4_3926	0.87	+0.2
4,366,355	+		Pf1N1B4_3927	0.55	-0.4
4,366,355	+				-0.3
4,366,437	+				-0.3
4,366,441	+				+0.5
4,366,441	+				+0.7
4,366,442	-				-0.3
4,366,455	+				+1.1
4,366,455	+				+0.9
4,366,463	+				-0.9
4,366,464	-				-1.3
4,366,464	-				+1.1
4,366,550	+				-1.6
4,366,550	+				-0.3
4,366,561	+				+1.7
4,366,561	+		Pf1N1B4_3928	0.12	-0.3
4,366,561	+				-0.9
4,366,561	+		Pf1N1B4_3928	0.12	+1.1
4,366,561	+		Pf1N1B4_3928	0.12	+0.7
4,366,562	-		Pf1N1B4_3928	0.12	+0.7
4,366,562	-		Pf1N1B4_3928	0.12	-1.4
4,366,562	-		Pf1N1B4_3928	0.12	+0.7
4,366,562	-		Pf1N1B4_3928	0.12	+0.5
4,366,677	+		Pf1N1B4_3928	0.71	+1.5
4,366,678	-		Pf1N1B4_3928	0.72	-0.6
4,366,751	+				+3.1
4,366,752	-				-1.1
4,366,752	-				-0.6
4,366,802	+				+1.4
4,366,802	+				-0.9
4,366,802	+				-1.9
4,366,802	+				+1.5
4,366,802	+				-1.1
4,366,802	+				-0.9
4,366,803	-				-0.9
4,366,803	-				-0.3
4,366,803	-				+0.8
4,366,806	+				-0.6
4,366,806	+				+0.1
4,366,806	+				-0.2
4,366,806	+				+0.5
4,366,806	+				-1.1
4,366,806	+				-0.3
4,366,807	-				-1.1
4,366,807	-				-0.5
4,366,807	-				+0.7
4,366,807	-				-0.1
4,366,858	+				-0.5
4,366,904	+				+0.7
4,366,904	+				-1.3
4,366,950	-				+0.1
4,366,950	-				+0.1
4,367,006	+		Pf1N1B4_3929	0.21	-1.6
4,367,007	-		Pf1N1B4_3929	0.21	+0.7
4,367,007	-		Pf1N1B4_3929	0.21	+1.3
4,367,009	+		Pf1N1B4_3929	0.22	-1.3
4,367,009	+		Pf1N1B4_3929	0.22	+0.3
4,367,009	+		Pf1N1B4_3929	0.22	-0.0
4,367,009	+		Pf1N1B4_3929	0.22	-2.4
4,367,010	-		Pf1N1B4_3929	0.22	-0.3
4,367,027	+		Pf1N1B4_3929	0.27	-1.9
4,367,030	+		Pf1N1B4_3929	0.27	-1.1
4,367,030	+		Pf1N1B4_3929	0.27	+0.1
4,367,030	+		Pf1N1B4_3929	0.27	+0.6
4,367,030	+		Pf1N1B4_3929	0.27	-0.5
4,367,031	-		Pf1N1B4_3929	0.28	-1.9
4,367,031	-		Pf1N1B4_3929	0.28	-1.0
4,367,031	-		Pf1N1B4_3929	0.28	+0.7
4,367,031	-		Pf1N1B4_3929	0.28	-0.9
4,367,048	+		Pf1N1B4_3929	0.32	-0.4
4,367,049	-		Pf1N1B4_3929	0.33	-0.9
4,367,067	-		Pf1N1B4_3929	0.37	+1.3
4,367,070	-		Pf1N1B4_3929	0.38	+0.7
4,367,070	-		Pf1N1B4_3929	0.38	-0.9
4,367,086	+		Pf1N1B4_3929	0.42	-0.7
4,367,090	+		Pf1N1B4_3929	0.43	-1.6
4,367,090	+		Pf1N1B4_3929	0.43	-0.6
4,367,091	-		Pf1N1B4_3929	0.44	+0.5
4,367,091	-		Pf1N1B4_3929	0.44	+1.3
4,367,091	-		Pf1N1B4_3929	0.44	+0.0
4,367,091	-		Pf1N1B4_3929	0.44	+0.3
4,367,091	-		Pf1N1B4_3929	0.44	+0.5
4,367,112	-		Pf1N1B4_3929	0.49	-0.3
4,367,112	-		Pf1N1B4_3929	0.49	-0.4
4,367,129	+		Pf1N1B4_3929	0.54	-0.9
4,367,129	+		Pf1N1B4_3929	0.54	-1.0
4,367,129	+		Pf1N1B4_3929	0.54	+0.1
4,367,129	+		Pf1N1B4_3929	0.54	+0.1
4,367,129	+		Pf1N1B4_3929	0.54	-0.8
4,367,129	+		Pf1N1B4_3929	0.54	-1.1
4,367,130	-		Pf1N1B4_3929	0.54	-0.4
4,367,130	-		Pf1N1B4_3929	0.54	-0.9
4,367,130	-		Pf1N1B4_3929	0.54	-1.9
4,367,130	-		Pf1N1B4_3929	0.54	+0.3
4,367,130	-		Pf1N1B4_3929	0.54	-1.1
4,367,130	-		Pf1N1B4_3929	0.54	+0.8
4,367,130	-				+0.7
4,367,130	-		Pf1N1B4_3929	0.54	+1.7
4,367,130	-		Pf1N1B4_3929	0.54	-1.0
4,367,153	-		Pf1N1B4_3929	0.60	-0.0
4,367,278	+				-1.0
4,367,292	+				-0.7
4,367,304	+				+0.5
4,367,304	+				+0.7
4,367,304	+				+0.7
4,367,304	+				-1.3
4,367,304	+				-0.0
4,367,304	+				+0.5
4,367,305	-				+1.1
4,367,305	-				+0.1
4,367,305	-				-1.6
4,367,305	-				+0.1
4,367,305	-				-0.0
4,367,305	-				+1.3
4,367,305	-				+0.5
4,367,344	-				+0.7
4,367,344	-				-1.3
4,367,366	-				+0.7
4,367,371	+				-0.9
4,367,371	+				-0.0
4,367,371	+				+0.1
4,367,371	+				+0.1
4,367,372	-				-1.9
4,367,372	-				-0.9
4,367,473	+				+0.3
4,367,473	+				-1.3
4,367,474	-				+0.1
4,367,474	-				+0.7
4,367,474	-				+1.5
4,367,525	-				+0.7
4,367,621	+				-2.9
4,367,658	+		Pf1N1B4_3930	0.14	+0.3
4,367,658	+		Pf1N1B4_3930	0.14	-0.1
4,367,658	+		Pf1N1B4_3930	0.14	-0.6
4,367,659	-		Pf1N1B4_3930	0.14	+1.1