Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3540

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
3,946,104	+				+2.8
3,946,213	+		Pf1N1B4_3539	0.17	-0.8
3,946,213	+		Pf1N1B4_3539	0.17	+0.4
3,946,214	-				+0.5
3,946,214	-		Pf1N1B4_3539	0.17	+0.7
3,946,214	-		Pf1N1B4_3539	0.17	+0.2
3,946,214	-		Pf1N1B4_3539	0.17	+0.2
3,946,261	+		Pf1N1B4_3539	0.23	-2.8
3,946,261	+		Pf1N1B4_3539	0.23	-2.8
3,946,261	+		Pf1N1B4_3539	0.23	-0.1
3,946,261	+				+1.4
3,946,261	+		Pf1N1B4_3539	0.23	-1.2
3,946,261	+		Pf1N1B4_3539	0.23	-2.0
3,946,261	+		Pf1N1B4_3539	0.23	+1.4
3,946,261	+		Pf1N1B4_3539	0.23	-0.2
3,946,262	-		Pf1N1B4_3539	0.23	-0.5
3,946,262	-		Pf1N1B4_3539	0.23	+0.4
3,946,262	-		Pf1N1B4_3539	0.23	+0.4
3,946,262	-		Pf1N1B4_3539	0.23	+0.3
3,946,262	-		Pf1N1B4_3539	0.23	+0.8
3,946,262	-				-0.8
3,946,262	-		Pf1N1B4_3539	0.23	+0.8
3,946,262	-		Pf1N1B4_3539	0.23	+0.2
3,946,262	-		Pf1N1B4_3539	0.23	-0.3
3,946,262	-		Pf1N1B4_3539	0.23	-1.2
3,946,262	-		Pf1N1B4_3539	0.23	+0.8
3,946,262	-		Pf1N1B4_3539	0.23	-0.4
3,946,262	-		Pf1N1B4_3539	0.23	-0.4
3,946,279	-		Pf1N1B4_3539	0.25	-1.5
3,946,333	+		Pf1N1B4_3539	0.32	+0.8
3,946,333	+		Pf1N1B4_3539	0.32	-0.6
3,946,333	+		Pf1N1B4_3539	0.32	+0.6
3,946,333	+		Pf1N1B4_3539	0.32	+0.4
3,946,334	-		Pf1N1B4_3539	0.32	-0.2
3,946,334	-		Pf1N1B4_3539	0.32	-1.5
3,946,334	-				-1.2
3,946,534	-		Pf1N1B4_3539	0.57	+0.0
3,946,583	-		Pf1N1B4_3539	0.63	+0.0
3,946,600	+				+0.2
3,946,600	+		Pf1N1B4_3539	0.65	+0.0
3,946,747	+		Pf1N1B4_3539	0.83	+1.5
3,946,747	+				-0.8
3,946,819	+				-1.2
3,946,819	+				-0.2
3,946,866	+				+0.2
3,946,866	+				-0.5
3,946,898	+				-0.8
3,946,898	+				-0.9
3,946,899	-				-0.3
3,946,899	-				-1.8
3,946,899	-				+0.8
3,946,958	+				-2.0
3,946,959	-				-0.2
3,946,959	-				+0.8
3,946,959	-				-0.8
3,946,973	+				+0.8
3,946,974	-				+0.2
3,946,974	-				-0.8
3,947,123	+				+2.0
3,947,186	+		Pf1N1B4_3540	0.38	-0.2
3,947,186	+		Pf1N1B4_3540	0.38	-0.1
3,947,186	+		Pf1N1B4_3540	0.38	-0.8
3,947,187	-		Pf1N1B4_3540	0.38	+1.1
3,947,187	-		Pf1N1B4_3540	0.38	-1.2
3,947,187	-		Pf1N1B4_3540	0.38	-0.4
3,947,187	-		Pf1N1B4_3540	0.38	+0.2
3,947,190	-		Pf1N1B4_3540	0.39	-1.6
3,947,282	+		Pf1N1B4_3540	0.54	-0.2
3,947,330	+		Pf1N1B4_3540	0.63	-0.3
3,947,330	+				+1.2
3,947,331	-		Pf1N1B4_3540	0.63	+0.9
3,947,331	-		Pf1N1B4_3540	0.63	+0.8
3,947,331	-		Pf1N1B4_3540	0.63	+1.3
3,947,331	-		Pf1N1B4_3540	0.63	+0.4
3,947,331	-		Pf1N1B4_3540	0.63	+1.1
3,947,331	-		Pf1N1B4_3540	0.63	+0.2
3,947,331	-				-0.2
3,947,425	+		Pf1N1B4_3540	0.79	+0.2
3,947,523	+				-0.5
3,947,524	-				+0.8
3,947,592	+				-0.2
3,947,652	-				+1.4
3,947,652	-				+0.1
3,947,684	+		Pf1N1B4_3541	0.11	-2.5
3,947,685	-		Pf1N1B4_3541	0.11	+0.2
3,947,685	-		Pf1N1B4_3541	0.11	-1.2
3,947,778	+				-0.2
3,947,778	+		Pf1N1B4_3541	0.41	+0.8
3,947,778	+		Pf1N1B4_3541	0.41	+0.1
3,947,778	+		Pf1N1B4_3541	0.41	-0.2
3,947,779	-		Pf1N1B4_3541	0.41	-1.8
3,947,779	-		Pf1N1B4_3541	0.41	-2.0
3,947,779	-		Pf1N1B4_3541	0.41	-1.2
3,947,779	-		Pf1N1B4_3541	0.41	-0.4
3,947,913	-		Pf1N1B4_3541	0.84	+0.4
3,948,015	+				+0.2
3,948,015	+				-0.8
3,948,016	-				-0.2
3,948,019	+				-1.1
3,948,020	-				+0.2
3,948,020	-				-1.6
3,948,057	-				-2.6
3,948,068	+				+1.3
3,948,069	-				-0.5
3,948,109	+				-1.2
3,948,113	-				+0.3
3,948,225	+				+0.4
3,948,483	+		Pf1N1B4_3542	0.32	-0.5