Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3538

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
3,944,279	+		Pf1N1B4_3537	0.32	-0.5
3,944,279	+		Pf1N1B4_3537	0.32	-0.2
3,944,280	-		Pf1N1B4_3537	0.32	+1.1
3,944,288	+		Pf1N1B4_3537	0.33	-0.8
3,944,289	-		Pf1N1B4_3537	0.33	+0.6
3,944,289	-		Pf1N1B4_3537	0.33	-0.2
3,944,289	-		Pf1N1B4_3537	0.33	+0.6
3,944,289	-		Pf1N1B4_3537	0.33	-0.8
3,944,495	-		Pf1N1B4_3537	0.56	+0.1
3,944,495	-		Pf1N1B4_3537	0.56	-1.3
3,944,495	-		Pf1N1B4_3537	0.56	+0.5
3,944,498	-		Pf1N1B4_3537	0.57	-1.0
3,944,898	-				-0.2
3,944,935	-				+0.7
3,944,935	-				-1.2
3,945,005	-				+0.2
3,945,005	-				-1.3
3,945,130	+				-0.2
3,945,130	+				-1.5
3,945,136	+				+1.0
3,945,137	-				-1.6
3,945,155	+				-0.5
3,945,156	-				-0.2
3,945,156	-				-1.2
3,945,156	-				-0.1
3,945,352	+		Pf1N1B4_3538	0.23	+0.8
3,945,353	-		Pf1N1B4_3538	0.23	-1.5
3,945,353	-				-1.5
3,945,353	-		Pf1N1B4_3538	0.23	+1.3
3,945,460	+		Pf1N1B4_3538	0.37	+0.3
3,945,490	+		Pf1N1B4_3538	0.41	+0.2
3,945,490	+		Pf1N1B4_3538	0.41	+0.6
3,945,908	-				-1.5
3,946,104	+				+2.8
3,946,213	+		Pf1N1B4_3539	0.17	-0.8
3,946,213	+		Pf1N1B4_3539	0.17	+0.4
3,946,214	-				+0.5
3,946,214	-		Pf1N1B4_3539	0.17	+0.7
3,946,214	-		Pf1N1B4_3539	0.17	+0.2
3,946,214	-		Pf1N1B4_3539	0.17	+0.2
3,946,261	+		Pf1N1B4_3539	0.23	-2.8
3,946,261	+		Pf1N1B4_3539	0.23	-2.8
3,946,261	+		Pf1N1B4_3539	0.23	-0.1
3,946,261	+				+1.4
3,946,261	+		Pf1N1B4_3539	0.23	-1.2
3,946,261	+		Pf1N1B4_3539	0.23	-2.0
3,946,261	+		Pf1N1B4_3539	0.23	+1.4
3,946,261	+		Pf1N1B4_3539	0.23	-0.2
3,946,262	-		Pf1N1B4_3539	0.23	-0.5
3,946,262	-		Pf1N1B4_3539	0.23	+0.4
3,946,262	-		Pf1N1B4_3539	0.23	+0.4
3,946,262	-		Pf1N1B4_3539	0.23	+0.3
3,946,262	-		Pf1N1B4_3539	0.23	+0.8
3,946,262	-				-0.8
3,946,262	-		Pf1N1B4_3539	0.23	+0.8
3,946,262	-		Pf1N1B4_3539	0.23	+0.2
3,946,262	-		Pf1N1B4_3539	0.23	-0.3
3,946,262	-		Pf1N1B4_3539	0.23	-1.2
3,946,262	-		Pf1N1B4_3539	0.23	+0.8
3,946,262	-		Pf1N1B4_3539	0.23	-0.4
3,946,262	-		Pf1N1B4_3539	0.23	-0.4
3,946,279	-		Pf1N1B4_3539	0.25	-1.5
3,946,333	+		Pf1N1B4_3539	0.32	+0.8
3,946,333	+		Pf1N1B4_3539	0.32	-0.6
3,946,333	+		Pf1N1B4_3539	0.32	+0.6
3,946,333	+		Pf1N1B4_3539	0.32	+0.4
3,946,334	-		Pf1N1B4_3539	0.32	-0.2
3,946,334	-		Pf1N1B4_3539	0.32	-1.5
3,946,334	-				-1.2
3,946,534	-		Pf1N1B4_3539	0.57	+0.0
3,946,583	-		Pf1N1B4_3539	0.63	+0.0
3,946,600	+				+0.2
3,946,600	+		Pf1N1B4_3539	0.65	+0.0
3,946,747	+		Pf1N1B4_3539	0.83	+1.5
3,946,747	+				-0.8
3,946,819	+				-1.2
3,946,819	+				-0.2
3,946,866	+				+0.2
3,946,866	+				-0.5
3,946,898	+				-0.8
3,946,898	+				-0.9
3,946,899	-				-0.3
3,946,899	-				-1.8
3,946,899	-				+0.8