Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3350

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
3,736,447	-				+0.9
3,736,465	+				-0.3
3,736,489	-				+0.3
3,736,564	+				+0.9
3,736,564	+				+1.3
3,736,633	+				-0.7
3,736,633	+				+1.4
3,736,633	+				-2.1
3,736,634	-				+0.9
3,736,634	-				+1.4
3,736,634	-				-0.1
3,736,634	-				+0.5
3,736,646	+				-0.2
3,736,646	+				-1.2
3,736,648	+				+0.8
3,736,648	+				-0.3
3,736,648	+				+0.9
3,736,649	-				-0.7
3,736,649	-				+0.6
3,736,649	-				-1.1
3,736,649	-				+1.4
3,736,649	-				-2.0
3,736,706	+				-0.9
3,736,709	+				+0.2
3,736,709	+				-1.1
3,736,709	+				+0.3
3,736,710	-				+1.9
3,736,710	-				+0.2
3,736,887	+		Pf1N1B4_3349	0.30	-1.8
3,736,887	+		Pf1N1B4_3349	0.30	+0.2
3,736,888	-		Pf1N1B4_3349	0.30	+0.7
3,736,888	-		Pf1N1B4_3349	0.30	+0.3
3,736,888	-		Pf1N1B4_3349	0.30	+0.6
3,736,888	-		Pf1N1B4_3349	0.30	-2.7
3,736,888	-		Pf1N1B4_3349	0.30	-0.5
3,736,890	+				-0.7
3,736,890	+		Pf1N1B4_3349	0.31	-1.8
3,736,890	+				+1.5
3,736,890	+		Pf1N1B4_3349	0.31	-1.7
3,736,891	-		Pf1N1B4_3349	0.31	-0.1
3,736,891	-		Pf1N1B4_3349	0.31	-1.9
3,736,891	-		Pf1N1B4_3349	0.31	+0.3
3,736,891	-		Pf1N1B4_3349	0.31	-0.6
3,736,891	-		Pf1N1B4_3349	0.31	-0.5
3,736,937	+		Pf1N1B4_3349	0.41	-0.2
3,737,117	+		Pf1N1B4_3349	0.81	+0.9
3,737,117	+		Pf1N1B4_3349	0.81	+1.2
3,737,117	+		Pf1N1B4_3349	0.81	-0.0
3,737,117	+		Pf1N1B4_3349	0.81	+1.9
3,737,117	+		Pf1N1B4_3349	0.81	-0.7
3,737,117	+		Pf1N1B4_3349	0.81	+0.2
3,737,117	+		Pf1N1B4_3349	0.81	+0.4
3,737,117	+		Pf1N1B4_3349	0.81	-0.7
3,737,117	+				-0.1
3,737,118	-		Pf1N1B4_3349	0.81	+0.2
3,737,135	+		Pf1N1B4_3349	0.85	+1.5
3,737,135	+		Pf1N1B4_3349	0.85	+1.3
3,737,135	+		Pf1N1B4_3349	0.85	+0.7
3,737,136	-		Pf1N1B4_3349	0.85	-1.0
3,737,136	-		Pf1N1B4_3349	0.85	+0.7
3,737,136	-		Pf1N1B4_3349	0.85	-0.7
3,737,136	-		Pf1N1B4_3349	0.85	-1.4
3,737,199	+				-1.9
3,737,247	+				+0.1
3,737,248	-				-0.8
3,737,291	+				+1.9
3,737,327	+				-0.1
3,737,327	+				+0.9
3,737,328	-				-0.7
3,737,328	-				+0.2
3,737,337	+				+0.2
3,737,425	+				-0.9
3,737,783	+		Pf1N1B4_3350	0.36	-0.1
3,738,113	-		Pf1N1B4_3350	0.63	-2.5
3,738,241	+		Pf1N1B4_3350	0.73	-2.1
3,738,244	+		Pf1N1B4_3350	0.74	-0.9
3,738,245	-		Pf1N1B4_3350	0.74	-1.4
3,738,245	-		Pf1N1B4_3350	0.74	-0.7
3,738,565	+				-0.4
3,738,600	+				-0.5
3,738,601	-				-0.1
3,738,601	-				-2.1
3,738,601	-				-0.2
3,738,669	+				-0.1
3,738,911	+		Pf1N1B4_3351	0.57	-1.1
3,738,912	-		Pf1N1B4_3351	0.57	-1.3
3,738,912	-		Pf1N1B4_3351	0.57	+0.6
3,738,956	+		Pf1N1B4_3351	0.69	-1.4
3,738,956	+		Pf1N1B4_3351	0.69	-1.1
3,738,956	+		Pf1N1B4_3351	0.69	+0.4
3,738,956	+		Pf1N1B4_3351	0.69	-0.3
3,739,045	+				+0.9
3,739,046	-				+1.9
3,739,052	+				-0.9
3,739,052	+				-0.1
3,739,109	+				-2.2
3,739,109	+				-0.2
3,739,109	+				+1.7
3,739,109	+				+0.2
3,739,110	-				+0.1
3,739,110	-				-1.4
3,739,110	-				-2.1
3,739,110	-				+0.9
3,739,113	+				-0.3
3,739,113	+				-0.4
3,739,113	+				-0.2
3,739,114	-				+0.1
3,739,114	-				+0.1
3,739,114	-				-0.1
3,739,114	-				-1.4
3,739,117	+				+0.3
3,739,118	-				+0.6
3,739,118	-				-0.3
3,739,271	+		Pf1N1B4_3352	0.23	+0.7
3,739,271	+		Pf1N1B4_3352	0.23	-0.7
3,739,271	+		Pf1N1B4_3352	0.23	-0.1
3,739,272	-		Pf1N1B4_3352	0.23	-1.7
3,739,337	+		Pf1N1B4_3352	0.37	+0.4
3,739,337	+		Pf1N1B4_3352	0.37	+0.3
3,739,337	+		Pf1N1B4_3352	0.37	-0.7
3,739,337	+				-1.1
3,739,337	+		Pf1N1B4_3352	0.37	+0.2
3,739,338	-		Pf1N1B4_3352	0.37	-0.2
3,739,338	-		Pf1N1B4_3352	0.37	-0.3
3,739,338	-		Pf1N1B4_3352	0.37	-0.4
3,739,361	+		Pf1N1B4_3352	0.42	-0.4
3,739,361	+		Pf1N1B4_3352	0.42	-0.1
3,739,467	-		Pf1N1B4_3352	0.64	-1.7