Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2954

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
3,307,440	+				+1.5
3,307,440	+				+0.5
3,307,893	+		Pf1N1B4_2953	0.54	-1.0
3,307,893	+		Pf1N1B4_2953	0.54	-0.3
3,307,894	-		Pf1N1B4_2953	0.54	+0.3
3,307,894	-		Pf1N1B4_2953	0.54	-0.2
3,307,894	-		Pf1N1B4_2953	0.54	+0.4
3,307,894	-		Pf1N1B4_2953	0.54	+0.3
3,308,056	-		Pf1N1B4_2953	0.70	-0.1
3,308,056	-		Pf1N1B4_2953	0.70	-0.9
3,308,100	+		Pf1N1B4_2953	0.75	+0.5
3,308,100	+		Pf1N1B4_2953	0.75	-0.7
3,308,101	-		Pf1N1B4_2953	0.75	-1.1
3,308,101	-		Pf1N1B4_2953	0.75	+0.1
3,308,101	-		Pf1N1B4_2953	0.75	+0.4
3,308,101	-		Pf1N1B4_2953	0.75	-1.7
3,308,330	+				+0.1
3,308,330	+				+0.4
3,308,331	-				+0.5
3,308,351	-				-0.2
3,308,383	-				+0.8
3,308,561	+		Pf1N1B4_2954	0.18	+0.9
3,308,561	+		Pf1N1B4_2954	0.18	-0.5
3,308,561	+		Pf1N1B4_2954	0.18	+0.8
3,308,561	+		Pf1N1B4_2954	0.18	-1.0
3,308,561	+		Pf1N1B4_2954	0.18	+1.1
3,308,562	-		Pf1N1B4_2954	0.18	+0.3
3,308,562	-		Pf1N1B4_2954	0.18	+1.0
3,308,562	-		Pf1N1B4_2954	0.18	-0.9
3,308,562	-		Pf1N1B4_2954	0.18	+0.1
3,308,562	-		Pf1N1B4_2954	0.18	+0.1
3,309,006	-		Pf1N1B4_2954	0.64	+0.5
3,309,356	+				+0.4
3,309,357	-				-0.2
3,309,397	+				-0.0
3,309,397	+				-0.5
3,309,398	-				-0.3
3,309,398	-				-0.1
3,309,443	+				-0.3
3,309,443	+				+0.4
3,309,443	+				-0.7
3,309,444	-				-1.9
3,309,481	+				+1.1
3,309,481	+				+0.7
3,309,481	+				-0.0
3,309,482	-				+0.7
3,309,527	+				+0.1
3,309,528	-				-1.5
3,309,539	+				-1.5
3,309,539	+				-0.3
3,309,540	-				+0.9
3,309,624	+				-1.1
3,309,625	-				-1.2
3,309,625	-				-0.9
3,309,625	-				+0.8
3,309,625	-				-1.7
3,309,625	-				-0.2
3,309,625	-				-0.2
3,309,864	+		Pf1N1B4_2955	0.39	-1.0
3,309,873	+		Pf1N1B4_2955	0.40	-0.3
3,309,873	+		Pf1N1B4_2955	0.40	+2.0
3,309,873	+		Pf1N1B4_2955	0.40	-0.3
3,309,873	+		Pf1N1B4_2955	0.40	+2.3
3,309,873	+		Pf1N1B4_2955	0.40	-1.1
3,309,874	-		Pf1N1B4_2955	0.40	-0.4
3,309,874	-		Pf1N1B4_2955	0.40	+0.9
3,310,086	+		Pf1N1B4_2955	0.74	+0.1
3,310,086	+		Pf1N1B4_2955	0.74	-0.1
3,310,087	-		Pf1N1B4_2955	0.74	-1.2
3,310,087	-		Pf1N1B4_2955	0.74	-0.6
3,310,087	-		Pf1N1B4_2955	0.74	+1.1
3,310,087	-		Pf1N1B4_2955	0.74	+0.9
3,310,259	+				-0.1
3,310,259	+				+1.4
3,310,259	+				+0.1
3,310,259	+				-0.5
3,310,259	+				-3.1
3,310,260	-				+0.5