Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2950

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
3,302,119	-		Pf1N1B4_2948	0.66	-0.8
3,302,143	-		Pf1N1B4_2948	0.75	+0.3
3,302,143	-		Pf1N1B4_2948	0.75	-1.2
3,302,143	-		Pf1N1B4_2948	0.75	-0.5
3,302,143	-		Pf1N1B4_2948	0.75	+1.1
3,302,520	+		Pf1N1B4_2949	0.44	-0.5
3,302,537	+		Pf1N1B4_2949	0.47	-0.3
3,302,538	-		Pf1N1B4_2949	0.47	-0.2
3,302,918	+				-0.4
3,302,919	-				-1.3
3,303,568	+		Pf1N1B4_2950	0.28	-0.3
3,304,161	+				+2.7
3,304,161	+				-0.5
3,304,161	+		Pf1N1B4_2950	0.56	-0.9
3,304,162	-		Pf1N1B4_2950	0.56	-0.1
3,304,162	-		Pf1N1B4_2950	0.56	+1.4
3,304,162	-		Pf1N1B4_2950	0.56	+1.1
3,304,197	+		Pf1N1B4_2950	0.57	+1.4
3,304,197	+		Pf1N1B4_2950	0.57	-1.2
3,304,197	+		Pf1N1B4_2950	0.57	+0.3
3,304,197	+		Pf1N1B4_2950	0.57	+0.7
3,304,198	-		Pf1N1B4_2950	0.57	+1.1
3,304,198	-		Pf1N1B4_2950	0.57	+0.4
3,304,198	-		Pf1N1B4_2950	0.57	-0.5
3,304,198	-		Pf1N1B4_2950	0.57	+0.9
3,304,198	-				+0.1
3,304,198	-		Pf1N1B4_2950	0.57	+0.8
3,304,296	+		Pf1N1B4_2950	0.62	+0.2
3,304,350	+		Pf1N1B4_2950	0.64	-0.8
3,304,427	+		Pf1N1B4_2950	0.68	+1.1
3,304,491	+		Pf1N1B4_2950	0.71	-0.8
3,304,491	+		Pf1N1B4_2950	0.71	-0.7
3,304,542	+		Pf1N1B4_2950	0.73	-1.7
3,304,542	+		Pf1N1B4_2950	0.73	-1.0
3,304,542	+		Pf1N1B4_2950	0.73	+0.1
3,304,542	+		Pf1N1B4_2950	0.73	+0.4
3,304,542	+		Pf1N1B4_2950	0.73	+0.4
3,304,542	+		Pf1N1B4_2950	0.73	+0.1
3,304,542	+		Pf1N1B4_2950	0.73	+0.5
3,304,543	-		Pf1N1B4_2950	0.73	-0.5
3,304,543	-		Pf1N1B4_2950	0.73	+0.1
3,304,543	-				-1.2
3,304,543	-		Pf1N1B4_2950	0.73	+0.8
3,304,543	-		Pf1N1B4_2950	0.73	+0.1
3,304,543	-		Pf1N1B4_2950	0.73	+0.4
3,304,543	-		Pf1N1B4_2950	0.73	-2.1
3,304,545	+		Pf1N1B4_2950	0.74	+1.1
3,304,545	+		Pf1N1B4_2950	0.74	+1.7
3,304,546	-		Pf1N1B4_2950	0.74	+0.7
3,304,546	-		Pf1N1B4_2950	0.74	+0.7
3,304,546	-		Pf1N1B4_2950	0.74	+0.7
3,304,546	-		Pf1N1B4_2950	0.74	-0.2
3,304,741	-		Pf1N1B4_2950	0.83	+0.6
3,305,028	+				-0.0
3,305,028	+				+2.4
3,305,028	+				-0.5
3,305,028	+				-0.6
3,305,028	+				-0.1
3,305,029	-				-0.2
3,305,147	+				-1.6
3,305,260	+				-1.5
3,305,260	+				-0.9
3,305,260	+				+0.1
3,305,260	+				+0.5
3,305,260	+				+0.5
3,305,260	+				-0.7
3,305,260	+				-0.5
3,305,261	-				-0.1
3,305,261	-				-1.7
3,305,261	-				+0.3
3,305,304	+				+1.7
3,305,304	+				-1.2
3,305,305	-				+3.7
3,305,305	-				+0.6
3,305,311	+				-0.5
3,305,311	+				-0.5
3,305,312	-				-1.0
3,305,324	+				+0.1
3,305,324	+				-1.1
3,305,324	+				+0.5
3,305,324	+				-0.9
3,305,325	-				+0.5
3,305,338	-				-0.5
3,305,351	+				-0.2
3,305,351	+				-0.2
3,305,351	+				-0.3
3,305,351	+				-0.3
3,305,351	+				+0.2
3,305,351	+				+0.2
3,305,352	-				+0.8
3,305,352	-				-1.1
3,305,352	-				+0.6
3,305,390	+				-1.5
3,305,390	+				+0.3
3,305,390	+				+1.1
3,305,493	+		Pf1N1B4_2951	0.13	+0.1
3,305,493	+		Pf1N1B4_2951	0.13	-1.1
3,305,493	+		Pf1N1B4_2951	0.13	+0.3
3,305,493	+				-0.5
3,305,493	+		Pf1N1B4_2951	0.13	-1.5
3,305,493	+		Pf1N1B4_2951	0.13	+1.3
3,305,493	+		Pf1N1B4_2951	0.13	-0.2
3,305,493	+		Pf1N1B4_2951	0.13	-1.7
3,305,493	+		Pf1N1B4_2951	0.13	-0.9
3,305,493	+				+0.5
3,305,493	+		Pf1N1B4_2951	0.13	+0.1
3,305,494	-		Pf1N1B4_2951	0.13	-0.1
3,305,494	-				-0.9
3,305,494	-		Pf1N1B4_2951	0.13	-0.3
3,305,535	+		Pf1N1B4_2951	0.18	+0.1
3,305,535	+		Pf1N1B4_2951	0.18	-0.7
3,305,535	+		Pf1N1B4_2951	0.18	+0.5
3,305,548	-		Pf1N1B4_2951	0.20	-0.3
3,305,754	+		Pf1N1B4_2951	0.45	+0.4
3,305,955	+		Pf1N1B4_2951	0.70	+0.1
3,305,955	+		Pf1N1B4_2951	0.70	-0.9