Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1405

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
1,609,718	+		Pf1N1B4_1404	0.10	+0.3
1,609,718	+		Pf1N1B4_1404	0.10	+0.2
1,609,718	+		Pf1N1B4_1404	0.10	+1.3
1,609,718	+		Pf1N1B4_1404	0.10	-0.5
1,609,719	-		Pf1N1B4_1404	0.10	+1.3
1,609,719	-		Pf1N1B4_1404	0.10	+1.3
1,609,719	-		Pf1N1B4_1404	0.10	-1.0
1,609,719	-		Pf1N1B4_1404	0.10	-1.0
1,609,719	-		Pf1N1B4_1404	0.10	+0.0
1,609,868	+		Pf1N1B4_1404	0.25	-1.0
1,609,868	+		Pf1N1B4_1404	0.25	+1.3
1,609,868	+		Pf1N1B4_1404	0.25	-0.1
1,609,869	-		Pf1N1B4_1404	0.25	+1.3
1,609,869	-				+0.3
1,609,869	-		Pf1N1B4_1404	0.25	+0.7
1,609,869	-		Pf1N1B4_1404	0.25	+0.0
1,609,869	-		Pf1N1B4_1404	0.25	+0.9
1,609,869	-		Pf1N1B4_1404	0.25	-0.8
1,609,961	+		Pf1N1B4_1404	0.34	-0.2
1,609,961	+		Pf1N1B4_1404	0.34	+0.9
1,609,961	+		Pf1N1B4_1404	0.34	-0.9
1,609,961	+		Pf1N1B4_1404	0.34	+0.0
1,609,962	-		Pf1N1B4_1404	0.35	-0.9
1,609,962	-		Pf1N1B4_1404	0.35	-1.5
1,609,962	-		Pf1N1B4_1404	0.35	-0.2
1,609,962	-		Pf1N1B4_1404	0.35	-0.7
1,610,149	+		Pf1N1B4_1404	0.53	+0.1
1,610,213	+		Pf1N1B4_1404	0.59	-2.4
1,610,213	+		Pf1N1B4_1404	0.59	+0.8
1,610,213	+		Pf1N1B4_1404	0.59	-0.2
1,610,213	+		Pf1N1B4_1404	0.59	-1.0
1,610,213	+		Pf1N1B4_1404	0.59	+0.8
1,610,213	+		Pf1N1B4_1404	0.59	-1.7
1,610,214	-		Pf1N1B4_1404	0.59	+0.1
1,610,214	-		Pf1N1B4_1404	0.59	+0.6
1,610,214	-		Pf1N1B4_1404	0.59	-2.0
1,610,214	-		Pf1N1B4_1404	0.59	-0.2
1,610,214	-		Pf1N1B4_1404	0.59	+1.0
1,610,282	+		Pf1N1B4_1404	0.66	-0.8
1,610,282	+		Pf1N1B4_1404	0.66	-0.3
1,610,282	+		Pf1N1B4_1404	0.66	+1.2
1,610,282	+		Pf1N1B4_1404	0.66	-0.5
1,610,283	-		Pf1N1B4_1404	0.66	-0.4
1,610,283	-		Pf1N1B4_1404	0.66	+0.8
1,610,283	-		Pf1N1B4_1404	0.66	+0.3
1,610,283	-		Pf1N1B4_1404	0.66	+0.1
1,610,283	-		Pf1N1B4_1404	0.66	+0.8
1,610,283	-		Pf1N1B4_1404	0.66	+0.2
1,610,285	+		Pf1N1B4_1404	0.66	-0.1
1,610,286	-		Pf1N1B4_1404	0.67	+0.6
1,610,336	+		Pf1N1B4_1404	0.72	-0.7
1,610,337	-		Pf1N1B4_1404	0.72	+0.5
1,610,337	-		Pf1N1B4_1404	0.72	+1.6
1,610,337	-		Pf1N1B4_1404	0.72	-0.0
1,610,337	-		Pf1N1B4_1404	0.72	+0.3
1,610,435	+		Pf1N1B4_1404	0.81	+1.8
1,610,435	+		Pf1N1B4_1404	0.81	-1.7
1,610,435	+		Pf1N1B4_1404	0.81	+0.8
1,610,435	+		Pf1N1B4_1404	0.81	+1.1
1,610,435	+		Pf1N1B4_1404	0.81	-1.0
1,610,436	-		Pf1N1B4_1404	0.81	-0.7
1,610,436	-		Pf1N1B4_1404	0.81	-0.3
1,610,636	+				+1.2
1,610,662	+				-1.3
1,610,662	+				-0.5
1,610,663	-				-2.0
1,610,746	+				-1.0
1,610,746	+				+1.3
1,610,746	+				+0.3
1,610,746	+				+0.9
1,610,746	+				-0.2
1,610,746	+				-0.1
1,610,746	+				-0.3
1,610,746	+				+0.3
1,610,746	+				-0.7
1,610,746	+				+0.0
1,610,746	+				-1.2
1,610,746	+				+1.3
1,610,746	+				+0.3
1,610,747	-				-0.6
1,610,747	-				+1.2
1,610,747	-				+0.7
1,610,747	-				+1.5
1,610,747	-				-0.9
1,610,747	-				-1.7
1,610,809	+				-1.0
1,610,809	+				+1.2
1,610,809	+				-1.6
1,610,809	+				-0.8
1,610,809	+				+0.9
1,610,809	+				+1.3
1,610,810	-				-1.2
1,610,810	-				-0.8
1,610,810	-				-0.3
1,610,810	-				+2.3
1,610,829	+		Pf1N1B4_1405	0.11	+0.3
1,610,832	+		Pf1N1B4_1405	0.11	-0.7
1,610,832	+		Pf1N1B4_1405	0.11	-0.8
1,610,832	+		Pf1N1B4_1405	0.11	-0.2
1,610,832	+		Pf1N1B4_1405	0.11	-3.3
1,610,832	+		Pf1N1B4_1405	0.11	-0.7
1,610,832	+		Pf1N1B4_1405	0.11	-0.5
1,610,833	-		Pf1N1B4_1405	0.11	-1.0
1,611,159	+		Pf1N1B4_1405	0.32	+0.2
1,611,159	+		Pf1N1B4_1405	0.32	-0.5
1,611,159	+		Pf1N1B4_1405	0.32	+1.0
1,611,283	+		Pf1N1B4_1405	0.41	+0.3
1,611,283	+		Pf1N1B4_1405	0.41	-1.7
1,611,283	+		Pf1N1B4_1405	0.41	+1.3
1,611,283	+		Pf1N1B4_1405	0.41	-0.4
1,611,283	+		Pf1N1B4_1405	0.41	-0.5
1,611,284	-		Pf1N1B4_1405	0.41	-0.7
1,611,284	-		Pf1N1B4_1405	0.41	+0.6
1,611,284	-		Pf1N1B4_1405	0.41	+0.5
1,611,365	+		Pf1N1B4_1405	0.46	+0.8
1,611,366	-		Pf1N1B4_1405	0.46	-0.5
1,611,478	+		Pf1N1B4_1405	0.53	-1.0
1,611,775	+		Pf1N1B4_1405	0.73	-1.5
1,611,775	+		Pf1N1B4_1405	0.73	+0.0
1,611,775	+		Pf1N1B4_1405	0.73	+0.9
1,611,775	+		Pf1N1B4_1405	0.73	-1.2
1,611,775	+		Pf1N1B4_1405	0.73	+1.3
1,611,775	+		Pf1N1B4_1405	0.73	-0.8
1,611,775	+		Pf1N1B4_1405	0.73	-1.2
1,611,775	+		Pf1N1B4_1405	0.73	-0.7
1,611,775	+		Pf1N1B4_1405	0.73	-2.2
1,611,775	+		Pf1N1B4_1405	0.73	+1.1
1,611,776	-		Pf1N1B4_1405	0.73	-0.5
1,611,776	-				+0.9
1,611,776	-		Pf1N1B4_1405	0.73	-0.7
1,611,790	+		Pf1N1B4_1405	0.74	-0.5
1,611,790	+		Pf1N1B4_1405	0.74	+2.8
1,611,791	-		Pf1N1B4_1405	0.74	+0.8
1,611,820	+		Pf1N1B4_1405	0.76	-0.7
1,612,053	+				+1.3
1,612,054	-				-1.6
1,612,154	-				-0.2
1,612,174	+				-0.8
1,612,174	+				+1.1
1,612,174	+				+0.1
1,612,174	+				+0.3
1,612,174	+				+0.3
1,612,174	+				-0.7
1,612,174	+				-0.7
1,612,175	-				+2.3
1,612,175	-				-0.2
1,612,175	-				-1.1
1,612,175	-				+0.2
1,612,175	-				-0.7
1,612,175	-				-0.1
1,612,259	+				-0.1
1,612,259	+				-1.5
1,612,259	+				-1.8
1,612,260	-				+0.3
1,612,304	+				+0.7
1,612,305	-				-0.4
1,612,305	-				-0.7
1,612,313	+				-0.2
1,612,314	-				+0.0
1,613,166	+		Pf1N1B4_1406	0.47	+0.6
1,613,166	+		Pf1N1B4_1406	0.47	+1.1
1,613,167	-		Pf1N1B4_1406	0.47	-0.4
1,613,167	-		Pf1N1B4_1406	0.47	-0.2