Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1263
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
1,443,785 | - | Pf1N1B4_1262 | 0.79 | -0.5 | |
1,444,108 | - | -0.4 | |||
1,444,146 | + | +1.3 | |||
1,444,146 | + | -1.2 | |||
1,444,146 | + | +0.7 | |||
1,444,147 | - | +1.3 | |||
1,444,147 | - | +0.8 | |||
1,444,147 | - | -0.3 | |||
1,444,249 | + | -1.3 | |||
1,444,349 | + | Pf1N1B4_1263 | 0.14 | -2.2 | |
1,444,349 | + | Pf1N1B4_1263 | 0.14 | -1.2 | |
1,444,406 | + | Pf1N1B4_1263 | 0.28 | -0.7 | |
1,444,426 | + | Pf1N1B4_1263 | 0.32 | -0.7 | |
1,444,427 | - | Pf1N1B4_1263 | 0.33 | -2.2 | |
1,444,618 | - | Pf1N1B4_1263 | 0.79 | +0.3 | |
1,444,789 | + | Pf1N1B4_1264 | 0.11 | +0.3 | |
1,444,790 | - | Pf1N1B4_1264 | 0.11 | -0.2 | |
1,444,964 | - | Pf1N1B4_1264 | 0.25 | -0.4 | |
1,445,055 | - | Pf1N1B4_1264 | 0.33 | -1.3 | |
1,445,360 | - | Pf1N1B4_1264 | 0.58 | -0.3 | |
1,445,360 | - | Pf1N1B4_1264 | 0.58 | -1.6 | |
1,445,360 | - | Pf1N1B4_1264 | 0.58 | -1.0 | |
1,445,360 | - | Pf1N1B4_1264 | 0.58 | -1.7 | |
1,445,360 | - | Pf1N1B4_1264 | 0.58 | +0.1 | |
1,445,512 | - | Pf1N1B4_1264 | 0.70 | +0.2 | |
1,445,683 | + | Pf1N1B4_1264 | 0.84 | +0.1 |
Or see this region's nucleotide sequence