Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1042

Experiment: Chlorite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 1 mM
1,179,120	+		Pf1N1B4_1040	0.45	+1.1
1,179,120	+		Pf1N1B4_1040	0.45	-0.4
1,179,120	+		Pf1N1B4_1040	0.45	-0.9
1,179,121	-		Pf1N1B4_1040	0.45	+0.5
1,179,121	-		Pf1N1B4_1040	0.45	-1.9
1,179,121	-				-0.9
1,179,338	+		Pf1N1B4_1040	0.76	+1.1
1,179,338	+				-1.2
1,179,339	-		Pf1N1B4_1040	0.76	+0.1
1,179,427	+		Pf1N1B4_1040	0.88	-1.3
1,179,427	+		Pf1N1B4_1040	0.88	-1.2
1,179,427	+		Pf1N1B4_1040	0.88	-0.6
1,179,427	+		Pf1N1B4_1040	0.88	-2.0
1,179,428	-		Pf1N1B4_1040	0.88	+0.0
1,179,428	-		Pf1N1B4_1040	0.88	-0.4
1,179,428	-		Pf1N1B4_1040	0.88	-0.4
1,179,428	-		Pf1N1B4_1040	0.88	+0.6
1,179,428	-		Pf1N1B4_1040	0.88	+0.1
1,179,442	+				+1.9
1,179,460	+				-1.3
1,179,460	+				+0.7
1,179,460	+				+1.1
1,179,461	-				-0.7
1,179,461	-				-0.9
1,179,461	-				+1.1
1,179,508	+				+0.1
1,179,508	+				-0.4
1,179,508	+				-1.7
1,179,508	+				-2.2
1,179,508	+				-1.1
1,179,541	-				-0.2
1,179,573	-				-0.5
1,179,659	+		Pf1N1B4_1041	0.22	-0.2
1,179,659	+				-0.9
1,179,659	+		Pf1N1B4_1041	0.22	-1.9
1,179,660	-		Pf1N1B4_1041	0.22	-0.8
1,179,660	-				+2.1
1,179,660	-		Pf1N1B4_1041	0.22	-0.4
1,179,660	-		Pf1N1B4_1041	0.22	-0.0
1,179,674	+		Pf1N1B4_1041	0.24	-0.3
1,179,675	-		Pf1N1B4_1041	0.25	+0.1
1,179,761	+		Pf1N1B4_1041	0.40	-0.9
1,179,761	+		Pf1N1B4_1041	0.40	-0.9
1,179,762	-		Pf1N1B4_1041	0.40	+2.1
1,179,762	-		Pf1N1B4_1041	0.40	-2.0
1,179,815	+		Pf1N1B4_1041	0.49	+0.6
1,179,815	+		Pf1N1B4_1041	0.49	-1.1
1,179,815	+				-1.2
1,179,815	+		Pf1N1B4_1041	0.49	-1.9
1,179,815	+		Pf1N1B4_1041	0.49	+0.1
1,179,816	-		Pf1N1B4_1041	0.49	+2.7
1,179,816	-		Pf1N1B4_1041	0.49	+0.4
1,179,816	-		Pf1N1B4_1041	0.49	+1.7
1,179,816	-		Pf1N1B4_1041	0.49	-1.4
1,179,816	-		Pf1N1B4_1041	0.49	+0.1
1,179,816	-		Pf1N1B4_1041	0.49	-0.3
1,179,816	-		Pf1N1B4_1041	0.49	-1.4
1,179,816	-		Pf1N1B4_1041	0.49	+0.3
1,179,816	-		Pf1N1B4_1041	0.49	+0.4
1,179,816	-		Pf1N1B4_1041	0.49	-0.7
1,179,816	-		Pf1N1B4_1041	0.49	-1.4
1,179,816	-		Pf1N1B4_1041	0.49	+1.9
1,179,816	-		Pf1N1B4_1041	0.49	-0.0
1,179,817	+		Pf1N1B4_1041	0.49	+0.7
1,179,818	-		Pf1N1B4_1041	0.49	+0.7
1,179,818	-		Pf1N1B4_1041	0.49	+1.1
1,179,868	+		Pf1N1B4_1041	0.58	-0.3
1,179,868	+		Pf1N1B4_1041	0.58	-0.4
1,179,868	+		Pf1N1B4_1041	0.58	-0.6
1,179,868	+		Pf1N1B4_1041	0.58	-0.5
1,179,869	-		Pf1N1B4_1041	0.58	-0.6
1,179,869	-		Pf1N1B4_1041	0.58	-0.4
1,179,869	-		Pf1N1B4_1041	0.58	+0.7
1,179,869	-		Pf1N1B4_1041	0.58	-0.4
1,180,063	+				-1.7
1,180,064	-				-1.2
1,180,064	-				+1.2
1,180,067	-				+0.1
1,180,106	+				+0.1
1,180,106	+				-1.2
1,180,106	+				-1.5
1,180,106	+				-0.9
1,180,106	+				+1.0
1,180,106	+				+0.5
1,180,106	+				-1.5
1,180,107	-				-1.1
1,180,107	-				+0.1
1,180,107	-				-0.8
1,180,107	-				+2.1
1,180,107	-				+0.6
1,180,176	-		Pf1N1B4_1042	0.17	-0.9
1,180,288	+		Pf1N1B4_1042	0.48	-1.0
1,180,288	+		Pf1N1B4_1042	0.48	-1.3
1,180,402	+		Pf1N1B4_1042	0.78	-1.2
1,180,402	+		Pf1N1B4_1042	0.78	-1.9
1,180,507	+				+0.6
1,180,508	-				-1.1
1,180,508	-				+0.4
1,180,508	-				-0.9
1,180,717	+		Pf1N1B4_1043	0.46	-0.7
1,180,717	+		Pf1N1B4_1043	0.46	+0.6
1,180,717	+		Pf1N1B4_1043	0.46	-1.5
1,180,717	+		Pf1N1B4_1043	0.46	-0.5
1,180,717	+		Pf1N1B4_1043	0.46	+1.1
1,180,717	+		Pf1N1B4_1043	0.46	-1.0
1,180,717	+		Pf1N1B4_1043	0.46	-1.3
1,180,717	+		Pf1N1B4_1043	0.46	+0.1
1,180,717	+		Pf1N1B4_1043	0.46	-1.5
1,180,717	+		Pf1N1B4_1043	0.46	-1.2
1,180,717	+		Pf1N1B4_1043	0.46	+0.7
1,180,717	+		Pf1N1B4_1043	0.46	-0.2
1,180,718	-		Pf1N1B4_1043	0.47	-1.3
1,180,718	-		Pf1N1B4_1043	0.47	-0.7
1,180,718	-		Pf1N1B4_1043	0.47	-1.7
1,180,718	-				+0.4
1,180,718	-		Pf1N1B4_1043	0.47	-1.9
1,180,718	-				+0.1
1,180,719	+		Pf1N1B4_1043	0.47	-0.8
1,180,719	+		Pf1N1B4_1043	0.47	-0.1
1,180,720	-		Pf1N1B4_1043	0.47	-0.3
1,180,720	-		Pf1N1B4_1043	0.47	+2.9
1,180,720	-		Pf1N1B4_1043	0.47	-0.5
1,180,720	-		Pf1N1B4_1043	0.47	-0.6
1,180,780	+		Pf1N1B4_1043	0.68	+0.9
1,180,792	+		Pf1N1B4_1043	0.72	-0.2
1,180,883	-				-0.2
1,180,928	-		Pf1N1B4_1044	0.18	+0.7
1,180,953	-		Pf1N1B4_1044	0.25	-1.0
1,181,279	+				+0.1
1,181,285	+				-0.1
1,181,285	+				+0.1
1,181,285	+				-1.2
1,181,285	+				-2.5
1,181,286	-				-1.0
1,181,286	-				-0.5
1,181,286	-				-0.6
1,181,286	-				-0.5
1,181,286	-				-0.0
1,181,308	+				-1.5
1,181,309	-				+0.7
1,181,309	-				-0.5
1,181,309	-				-2.6
1,181,328	+				-0.9
1,181,328	+				+0.9
1,181,329	-				-0.8
1,181,361	+				+0.3
1,181,361	+				-2.2
1,181,361	+				-2.0
1,181,361	+				+0.5
1,181,362	-				+0.3
1,181,362	-				-0.1
1,181,366	-				-0.8
1,181,366	-				-0.5