Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02826

Experiment: PYE with Tetracycline 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.00005 mg/ml
2,980,138	-				+0.6
2,980,153	+				-1.1
2,980,153	+				-0.8
2,980,153	+				-0.1
2,980,153	+				-1.4
2,980,156	-				+0.9
2,980,156	-				+2.2
2,980,161	-				-0.1
2,980,168	+				-1.0
2,980,173	+				-1.0
2,980,178	+				+0.2
2,980,179	-				+0.2
2,980,203	-				-1.0
2,980,219	+				-2.2
2,980,259	+		CCNA_02824	0.10	+0.9
2,980,267	-		CCNA_02824	0.13	+1.4
2,980,267	-		CCNA_02824	0.13	+2.8
2,980,267	-		CCNA_02824	0.13	-0.6
2,980,303	-		CCNA_02824	0.23	+1.7
2,980,341	-		CCNA_02824	0.34	+1.3
2,980,341	-		CCNA_02824	0.34	-0.7
2,980,341	-		CCNA_02824	0.34	+0.9
2,980,343	+		CCNA_02824	0.34	-0.6
2,980,343	+		CCNA_02824	0.34	-0.6
2,980,349	-		CCNA_02824	0.36	-0.3
2,980,351	-		CCNA_02824	0.36	+0.2
2,980,359	-		CCNA_02824	0.39	-0.6
2,980,370	+		CCNA_02824	0.42	+0.2
2,980,423	-		CCNA_02824	0.57	-0.4
2,980,437	+		CCNA_02824	0.61	+0.8
2,980,469	+		CCNA_02824	0.70	-0.3
2,980,472	-		CCNA_02824	0.71	-0.5
2,980,472	-		CCNA_02824	0.71	-1.0
2,980,493	+		CCNA_02824	0.77	+0.0
2,980,505	+		CCNA_02824	0.80	-2.7
2,980,506	-		CCNA_02824	0.80	-1.2
2,980,521	-		CCNA_02824	0.84	-0.8
2,980,539	+		CCNA_02824	0.90	-1.6
2,980,553	+				+0.0
2,980,556	-				-2.0
2,980,586	+				+0.5
2,980,594	-				-1.8
2,980,595	+				+0.3
2,980,595	-				-0.1
2,980,629	+		CCNA_02825	0.11	-1.7
2,980,659	-		CCNA_02825	0.19	+2.1
2,980,659	-		CCNA_02825	0.19	+0.8
2,980,666	-		CCNA_02825	0.20	-1.1
2,980,679	-		CCNA_02825	0.24	+0.1
2,980,702	+		CCNA_02825	0.30	-0.9
2,980,715	+		CCNA_02825	0.33	-0.8
2,980,727	-		CCNA_02825	0.36	+0.3
2,980,738	-		CCNA_02825	0.39	-0.3
2,980,753	+		CCNA_02825	0.42	-0.2
2,980,760	-		CCNA_02825	0.44	-0.3
2,980,785	+		CCNA_02825	0.51	+0.0
2,980,785	+		CCNA_02825	0.51	-0.4
2,980,793	-		CCNA_02825	0.53	+0.1
2,980,835	+		CCNA_02825	0.63	+1.7
2,980,843	-		CCNA_02825	0.65	-0.5
2,980,877	+		CCNA_02825	0.74	-1.1
2,980,879	+		CCNA_02825	0.75	-1.1
2,980,879	+		CCNA_02825	0.75	-0.5
2,980,885	-		CCNA_02825	0.76	-1.2
2,980,885	-		CCNA_02825	0.76	+0.4
2,980,886	+		CCNA_02825	0.76	-0.7
2,980,887	-		CCNA_02825	0.77	+1.5
2,980,887	-		CCNA_02825	0.77	-0.4
2,980,887	-		CCNA_02825	0.77	+0.7
2,980,894	+		CCNA_02825	0.78	-1.1
2,980,917	+		CCNA_02825	0.84	+0.5
2,980,917	+		CCNA_02825	0.84	-0.5
2,980,917	+		CCNA_02825	0.84	-0.9
2,980,925	-		CCNA_02825	0.86	-1.1
2,980,960	+				-1.3
2,980,968	-				+0.1
2,980,988	+				+1.5
2,980,996	-				+0.6
2,981,006	-				+0.1
2,981,025	+				-1.2
2,981,035	+				+1.5
2,981,035	+				+1.1
2,981,049	-				+0.2
2,981,059	+				-1.6
2,981,067	-				-3.1
2,981,100	+				-0.4
2,981,117	-				+2.2
2,981,136	-				-0.5
2,981,138	+				+0.7
2,981,138	+				+1.6
2,981,146	-				-0.2
2,981,146	-				+3.5
2,981,146	-				+0.6
2,981,170	+				-0.4
2,981,178	-				-0.2
2,981,191	-				-1.3
2,981,191	-				-1.7
2,981,192	-				-2.2
2,981,194	+				+1.2
2,981,255	-		CCNA_02826	0.14	-0.9
2,981,257	+		CCNA_02826	0.14	+0.0
2,981,257	+		CCNA_02826	0.14	+1.1
2,981,257	+				+1.5
2,981,265	-		CCNA_02826	0.15	-2.4
2,981,277	+		CCNA_02826	0.16	+0.8
2,981,282	+		CCNA_02826	0.17	-1.2
2,981,304	+		CCNA_02826	0.19	+1.0
2,981,304	+		CCNA_02826	0.19	-1.1
2,981,312	-		CCNA_02826	0.20	-0.6
2,981,312	-		CCNA_02826	0.20	-2.1
2,981,338	+		CCNA_02826	0.22	-1.2
2,981,339	-		CCNA_02826	0.22	-0.7
2,981,339	-		CCNA_02826	0.22	-0.9
2,981,346	-		CCNA_02826	0.23	-0.5
2,981,346	-		CCNA_02826	0.23	+1.0
2,981,346	-		CCNA_02826	0.23	+1.9
2,981,349	+		CCNA_02826	0.23	-0.6
2,981,349	-		CCNA_02826	0.23	-0.8
2,981,356	-		CCNA_02826	0.24	+1.5
2,981,366	+		CCNA_02826	0.25	+1.6
2,981,411	-		CCNA_02826	0.30	-1.9
2,981,416	-		CCNA_02826	0.30	+1.9
2,981,426	+		CCNA_02826	0.31	+0.6
2,981,443	+		CCNA_02826	0.33	-1.3
2,981,448	-		CCNA_02826	0.33	+0.3
2,981,468	-		CCNA_02826	0.35	-2.0
2,981,469	-		CCNA_02826	0.35	-0.3
2,981,472	+		CCNA_02826	0.35	+0.4
2,981,474	-		CCNA_02826	0.36	-1.0
2,981,479	+		CCNA_02826	0.36	+0.2
2,981,486	+		CCNA_02826	0.37	+0.1
2,981,516	-		CCNA_02826	0.40	-0.8
2,981,550	-		CCNA_02826	0.43	-0.2
2,981,560	-		CCNA_02826	0.44	-1.2
2,981,567	-		CCNA_02826	0.45	+0.7
2,981,577	+		CCNA_02826	0.46	-0.1
2,981,594	-		CCNA_02826	0.47	+1.5
2,981,596	-		CCNA_02826	0.48	-1.7
2,981,624	+		CCNA_02826	0.50	-2.3
2,981,632	+		CCNA_02826	0.51	+0.5
2,981,632	-		CCNA_02826	0.51	-0.9
2,981,640	-		CCNA_02826	0.52	-2.2
2,981,644	+		CCNA_02826	0.52	-2.1
2,981,644	+		CCNA_02826	0.52	-0.9
2,981,652	-		CCNA_02826	0.53	-2.9
2,981,669	-		CCNA_02826	0.55	-0.9
2,981,674	-		CCNA_02826	0.55	+0.7
2,981,682	+		CCNA_02826	0.56	-1.6
2,981,687	+		CCNA_02826	0.57	+1.4
2,981,738	-		CCNA_02826	0.61	+0.1
2,981,758	+		CCNA_02826	0.63	+0.5
2,981,764	-		CCNA_02826	0.64	-2.5
2,981,777	+		CCNA_02826	0.65	-1.5
2,981,817	-		CCNA_02826	0.69	-0.5
2,981,822	-		CCNA_02826	0.70	+1.6
2,981,829	+		CCNA_02826	0.70	+0.4
2,981,829	+		CCNA_02826	0.70	-0.2
2,981,837	-		CCNA_02826	0.71	-0.1
2,981,848	+		CCNA_02826	0.72	-0.1
2,981,848	+		CCNA_02826	0.72	+1.5
2,981,848	+		CCNA_02826	0.72	+0.1
2,981,848	+		CCNA_02826	0.72	-0.1
2,981,856	-		CCNA_02826	0.73	-0.9
2,981,856	-		CCNA_02826	0.73	+2.5
2,981,856	-		CCNA_02826	0.73	+0.0
2,981,856	-		CCNA_02826	0.73	-1.8
2,981,856	-		CCNA_02826	0.73	-0.4
2,981,856	-		CCNA_02826	0.73	-1.6
2,981,916	+		CCNA_02826	0.79	-1.2
2,981,916	+		CCNA_02826	0.79	+2.5
2,981,953	-		CCNA_02826	0.83	-0.9
2,981,956	+		CCNA_02826	0.83	-1.2
2,981,978	+		CCNA_02826	0.85	+0.6
2,981,983	+		CCNA_02826	0.85	-0.2
2,981,991	-		CCNA_02826	0.86	-1.3
2,981,991	-		CCNA_02826	0.86	+1.5
2,981,991	-		CCNA_02826	0.86	-0.1
2,982,019	-		CCNA_02826	0.89	+0.1
2,982,037	-				-0.2
2,982,059	+				+2.5
2,982,059	+				+2.1
2,982,087	+				-0.4
2,982,120	+				-0.2
2,982,130	+				+0.6
2,982,134	-				+0.7
2,982,134	-				+1.1
2,982,138	-				-0.4
2,982,175	+				-1.5
2,982,177	+				-1.2
2,982,199	-				+1.2
2,982,205	-				-1.6
2,982,233	-				+1.2
2,982,233	-				+1.5
2,982,233	-				+1.3