Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02660

Experiment: PYE with Tetracycline 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.00005 mg/ml
2,811,240	-		CCNA_02658	0.56	-0.4
2,811,268	-		CCNA_02658	0.60	+0.3
2,811,268	-		CCNA_02658	0.60	+0.4
2,811,428	+		CCNA_02658	0.80	-1.5
2,811,446	-		CCNA_02658	0.82	+0.3
2,811,495	+		CCNA_02658	0.88	-0.7
2,811,516	+				-0.8
2,811,521	+				-0.5
2,811,529	-				-0.1
2,811,601	+				+0.1
2,811,643	+				-0.8
2,811,643	+				-0.5
2,811,711	+				+1.3
2,811,780	+				+0.4
2,811,780	+				+2.2
2,811,836	-		CCNA_02659	0.20	-0.7
2,811,837	-		CCNA_02659	0.20	-1.9
2,811,847	+		CCNA_02659	0.23	-0.2
2,811,852	+		CCNA_02659	0.25	-0.1
2,811,899	+		CCNA_02659	0.37	+0.8
2,811,899	+		CCNA_02659	0.37	+0.6
2,811,907	-		CCNA_02659	0.40	-1.7
2,811,907	-		CCNA_02659	0.40	-1.5
2,811,907	-		CCNA_02659	0.40	-1.1
2,811,907	-		CCNA_02659	0.40	-1.3
2,811,917	-		CCNA_02659	0.42	-1.6
2,811,932	+		CCNA_02659	0.47	+2.5
2,811,956	+		CCNA_02659	0.53	+0.8
2,811,961	+		CCNA_02659	0.55	+0.6
2,811,969	-		CCNA_02659	0.57	-0.6
2,811,969	-		CCNA_02659	0.57	+0.0
2,811,969	-		CCNA_02659	0.57	-0.7
2,812,001	-		CCNA_02659	0.66	-0.5
2,812,016	+		CCNA_02659	0.70	+0.7
2,812,019	-		CCNA_02659	0.71	+0.9
2,812,028	+		CCNA_02659	0.73	+2.6
2,812,038	+		CCNA_02659	0.76	-0.3
2,812,049	+		CCNA_02659	0.79	+1.4
2,812,050	+		CCNA_02659	0.79	+0.7
2,812,063	+		CCNA_02659	0.83	-0.5
2,812,068	-		CCNA_02659	0.84	-1.8
2,812,086	+		CCNA_02659	0.89	+1.2
2,812,093	+				+1.1
2,812,093	+				+1.0
2,812,093	+				+0.3
2,812,101	-				-0.7
2,812,156	-				-1.0
2,812,156	-				-0.5
2,812,167	-				+1.1
2,812,192	-				+0.7
2,812,209	+				-1.9
2,812,209	+				+0.6
2,812,271	+		CCNA_02660	0.15	-0.7
2,812,279	-		CCNA_02660	0.17	-2.4
2,812,286	+		CCNA_02660	0.18	-1.4
2,812,294	-		CCNA_02660	0.19	-1.7
2,812,294	-		CCNA_02660	0.19	-1.8
2,812,316	-		CCNA_02660	0.23	+0.2
2,812,321	-		CCNA_02660	0.24	-0.5
2,812,324	+		CCNA_02660	0.24	-2.4
2,812,326	+		CCNA_02660	0.24	-1.1
2,812,340	-		CCNA_02660	0.27	-2.1
2,812,340	-		CCNA_02660	0.27	-0.8
2,812,340	-		CCNA_02660	0.27	-0.1
2,812,340	-		CCNA_02660	0.27	-2.2
2,812,340	-		CCNA_02660	0.27	-0.1
2,812,364	-		CCNA_02660	0.31	-1.8
2,812,374	-		CCNA_02660	0.32	-1.4
2,812,393	+		CCNA_02660	0.35	-0.1
2,812,393	+		CCNA_02660	0.35	+1.2
2,812,393	+		CCNA_02660	0.35	+0.1
2,812,393	+		CCNA_02660	0.35	-0.2
2,812,401	-		CCNA_02660	0.37	-0.2
2,812,401	-		CCNA_02660	0.37	-2.4
2,812,519	+		CCNA_02660	0.56	-0.5
2,812,524	+		CCNA_02660	0.57	+1.4
2,812,524	+		CCNA_02660	0.57	-0.2
2,812,532	-		CCNA_02660	0.58	-2.2
2,812,532	-		CCNA_02660	0.58	-3.0
2,812,534	-		CCNA_02660	0.58	-2.0
2,812,545	+		CCNA_02660	0.60	-0.2
2,812,547	+		CCNA_02660	0.60	-0.1
2,812,547	+		CCNA_02660	0.60	+1.3
2,812,547	+		CCNA_02660	0.60	+1.3
2,812,547	+		CCNA_02660	0.60	+0.6
2,812,555	-		CCNA_02660	0.62	+0.8
2,812,610	+		CCNA_02660	0.71	-0.1
2,812,677	+		CCNA_02660	0.81	+0.3
2,812,685	-		CCNA_02660	0.83	-2.4
2,812,707	-		CCNA_02660	0.86	-0.9
2,812,751	-				-0.1
2,812,751	-				+0.6
2,812,787	+				+0.4
2,812,850	-				+2.1
2,812,857	+				+0.2
2,812,857	-				-1.5
2,812,867	-				-1.3
2,812,963	+				-0.2
2,812,963	+				-1.1
2,812,963	+				+0.6
2,812,978	+				+1.0
2,812,996	+				-0.4
2,813,026	-				-0.1
2,813,049	+				-0.7
2,813,067	-				-2.1
2,813,067	-				+1.3
2,813,075	-				-0.9
2,813,194	+		CCNA_02661	0.12	-0.3
2,813,196	-		CCNA_02661	0.12	+0.2
2,813,227	+		CCNA_02661	0.13	-1.1
2,813,318	+		CCNA_02661	0.16	+1.6
2,813,323	+		CCNA_02661	0.16	+0.2
2,813,333	-		CCNA_02661	0.17	+0.8
2,813,350	-		CCNA_02661	0.17	-1.7
2,813,381	-		CCNA_02661	0.18	-1.3
2,813,416	-		CCNA_02661	0.20	-1.2
2,813,432	+		CCNA_02661	0.20	+0.3
2,813,440	-		CCNA_02661	0.21	+1.4
2,813,445	+		CCNA_02661	0.21	+0.3
2,813,456	+		CCNA_02661	0.21	+0.4
2,813,487	-		CCNA_02661	0.22	-0.6
2,813,513	+		CCNA_02661	0.23	+0.4
2,813,513	+		CCNA_02661	0.23	-0.9
2,813,513	+		CCNA_02661	0.23	+1.2
2,813,513	+		CCNA_02661	0.23	+1.1
2,813,513	+		CCNA_02661	0.23	+0.3
2,813,521	-		CCNA_02661	0.23	+0.2
2,813,521	-		CCNA_02661	0.23	+0.1
2,813,521	-		CCNA_02661	0.23	-1.4
2,813,521	-		CCNA_02661	0.23	+0.4
2,813,521	-		CCNA_02661	0.23	+2.5
2,813,521	-		CCNA_02661	0.23	+0.5
2,813,566	-		CCNA_02661	0.25	-1.3
2,813,578	+		CCNA_02661	0.25	+0.4
2,813,598	-		CCNA_02661	0.26	-0.1
2,813,611	+		CCNA_02661	0.27	-0.0
2,813,635	+		CCNA_02661	0.28	+1.6
2,813,635	+		CCNA_02661	0.28	+0.2
2,813,643	-		CCNA_02661	0.28	-0.5
2,813,643	-		CCNA_02661	0.28	+1.8
2,813,643	-		CCNA_02661	0.28	+0.4
2,813,649	-		CCNA_02661	0.28	+0.4
2,813,681	-		CCNA_02661	0.29	+0.6
2,813,756	+		CCNA_02661	0.32	+1.6
2,813,777	+		CCNA_02661	0.33	+1.2
2,813,777	+		CCNA_02661	0.33	-1.0
2,813,777	-		CCNA_02661	0.33	+0.8
2,813,777	-		CCNA_02661	0.33	+0.1
2,813,779	+		CCNA_02661	0.33	-1.9