Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02647

Experiment: PYE with Tetracycline 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.00005 mg/ml
2,799,809	-		CCNA_02646	0.68	+2.5
2,799,825	+		CCNA_02646	0.71	+1.4
2,799,854	-		CCNA_02646	0.77	+2.4
2,799,922	+				-0.1
2,799,973	-				-1.3
2,799,973	-				+0.3
2,799,974	-				+0.6
2,799,994	-				+1.4
2,800,015	-				+0.8
2,800,214	+				-0.5
2,800,221	+				-0.6
2,800,221	+				-1.8
2,800,229	-				-0.6
2,800,306	+				-1.6
2,800,318	+				+0.2
2,800,325	-				+0.3
2,800,326	-				+0.1
2,800,331	-				-0.4
2,800,753	+				-0.8
2,800,761	-				-0.4
2,800,761	-				-1.9
2,800,761	-				-0.2
2,800,761	-				-0.2
2,800,774	+				+0.6
2,800,795	+				-2.2
2,800,806	-				+1.2
2,800,806	-				-1.8
2,800,818	-				+0.1
2,800,857	+				+0.2
2,800,873	+				+0.9
2,800,881	-				+0.3
2,800,888	+				-1.4
2,800,888	-				-0.2
2,800,888	-				+0.3
2,800,888	-				-2.0
2,800,934	-		CCNA_02647	0.14	+0.9
2,800,934	-		CCNA_02647	0.14	+0.6
2,800,943	+		CCNA_02647	0.15	-0.7
2,800,950	-		CCNA_02647	0.16	+1.2
2,800,963	-		CCNA_02647	0.17	-1.0
2,800,972	+		CCNA_02647	0.18	-0.4
2,801,009	-		CCNA_02647	0.22	-0.2
2,801,030	+		CCNA_02647	0.25	+0.6
2,801,030	+		CCNA_02647	0.25	+0.6
2,801,030	+		CCNA_02647	0.25	-0.9
2,801,030	+		CCNA_02647	0.25	+0.1
2,801,030	+		CCNA_02647	0.25	-1.0
2,801,030	+		CCNA_02647	0.25	-0.7
2,801,030	+		CCNA_02647	0.25	-1.9
2,801,030	+		CCNA_02647	0.25	-2.6
2,801,030	+		CCNA_02647	0.25	-1.4
2,801,030	+		CCNA_02647	0.25	+2.7
2,801,030	+		CCNA_02647	0.25	-1.2
2,801,030	+		CCNA_02647	0.25	-0.3
2,801,038	-		CCNA_02647	0.26	+1.3
2,801,038	-		CCNA_02647	0.26	+0.9
2,801,038	-		CCNA_02647	0.26	+0.3
2,801,038	-		CCNA_02647	0.26	+0.4
2,801,038	-		CCNA_02647	0.26	+1.3
2,801,072	+		CCNA_02647	0.29	-0.2
2,801,112	+		CCNA_02647	0.34	-1.0
2,801,122	+		CCNA_02647	0.35	-1.6
2,801,122	+		CCNA_02647	0.35	-2.4
2,801,130	-		CCNA_02647	0.36	+0.1
2,801,154	-		CCNA_02647	0.38	-0.6
2,801,161	+		CCNA_02647	0.39	+0.4
2,801,169	-		CCNA_02647	0.40	-1.1
2,801,171	+		CCNA_02647	0.40	-0.6
2,801,171	+		CCNA_02647	0.40	-0.4
2,801,171	+		CCNA_02647	0.40	-0.1
2,801,190	+		CCNA_02647	0.42	-1.5
2,801,211	+		CCNA_02647	0.44	-0.9
2,801,214	+		CCNA_02647	0.45	-0.6
2,801,219	-		CCNA_02647	0.45	-1.5
2,801,243	-		CCNA_02647	0.48	-0.3
2,801,260	+				+3.2
2,801,266	+		CCNA_02647	0.50	-0.9
2,801,268	-		CCNA_02647	0.51	-2.4
2,801,268	-		CCNA_02647	0.51	-0.5
2,801,268	-		CCNA_02647	0.51	-0.8
2,801,268	-		CCNA_02647	0.51	+2.2
2,801,301	+		CCNA_02647	0.54	-2.0
2,801,309	-		CCNA_02647	0.55	-1.6
2,801,310	+		CCNA_02647	0.55	+0.6
2,801,315	-		CCNA_02647	0.56	+0.9
2,801,323	+		CCNA_02647	0.57	+0.9
2,801,340	-		CCNA_02647	0.58	-0.8
2,801,356	+		CCNA_02647	0.60	+0.9
2,801,393	-		CCNA_02647	0.64	+0.3
2,801,395	-		CCNA_02647	0.64	+0.0
2,801,414	-		CCNA_02647	0.66	-3.4
2,801,432	+		CCNA_02647	0.68	-1.8
2,801,468	+				+1.2
2,801,470	-		CCNA_02647	0.73	+0.4
2,801,475	-		CCNA_02647	0.73	+0.4
2,801,494	+		CCNA_02647	0.75	-2.0
2,801,518	+		CCNA_02647	0.78	-1.2
2,801,555	-		CCNA_02647	0.82	-0.4
2,801,555	-		CCNA_02647	0.82	-0.5
2,801,580	+		CCNA_02647	0.84	-1.2
2,801,585	+		CCNA_02647	0.85	-2.4
2,801,610	-		CCNA_02647	0.88	-1.1
2,801,641	+				-1.0
2,801,684	+				-0.8
2,801,692	-				-0.7
2,801,770	-				-2.8
2,801,806	+				-0.4
2,801,807	+				-0.7
2,801,807	+				-1.0
2,801,814	-				+1.1
2,801,815	+				-0.6
2,801,838	+				-0.8
2,801,838	+				+0.1
2,801,846	-				-1.0
2,801,846	-				-1.5
2,801,867	-				+1.0
2,801,902	-				+0.6
2,801,925	-				-0.5
2,801,941	+				+0.2
2,801,949	-				-1.1
2,801,971	+				-2.5
2,801,984	+				-0.4
2,801,984	+				-0.4
2,801,984	+				-0.9
2,801,984	+				-1.4
2,801,989	+				-1.4
2,801,989	+				+0.0
2,801,989	+				-0.7
2,801,989	+				-1.2
2,801,992	-				+1.5
2,801,992	-				-1.6
2,801,997	-				-1.8
2,801,997	-				+0.7
2,801,997	-				-2.3
2,801,997	-				+0.1
2,801,997	-				-0.4
2,801,997	-				-1.8
2,801,997	-				-0.2
2,801,997	-				+0.6
2,802,034	-				+0.1
2,802,040	+				-2.9
2,802,064	+				+1.1
2,802,064	+				-1.0
2,802,064	+				-0.4
2,802,094	+				+2.0
2,802,149	-				-2.2
2,802,182	-				+0.6
2,802,187	-				-2.0
2,802,189	+				-0.5
2,802,189	+				-2.5
2,802,207	-				-1.5
2,802,219	-				-2.1
2,802,275	-				-1.6
2,802,312	-				-0.5
2,802,312	-				-0.7
2,802,326	+		CCNA_02648	0.10	+0.4
2,802,361	+		CCNA_02648	0.14	-2.3
2,802,413	-		CCNA_02648	0.20	-1.4
2,802,448	-		CCNA_02648	0.23	-0.5
2,802,485	+		CCNA_02648	0.27	-1.5
2,802,485	+		CCNA_02648	0.27	-1.2
2,802,493	-		CCNA_02648	0.28	-0.0
2,802,504	+		CCNA_02648	0.30	-0.1
2,802,550	+		CCNA_02648	0.35	-0.5
2,802,581	-		CCNA_02648	0.38	-1.5
2,802,586	-		CCNA_02648	0.38	-1.5
2,802,625	+		CCNA_02648	0.43	-3.2
2,802,679	+		CCNA_02648	0.49	+0.5
2,802,715	+		CCNA_02648	0.52	-1.2
2,802,717	+		CCNA_02648	0.53	-1.3
2,802,717	+		CCNA_02648	0.53	-1.7