Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02500

Experiment: PYE with Tetracycline 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.00005 mg/ml
2,648,020	+				+1.1
2,648,028	+				-0.3
2,648,033	+				-1.4
2,648,035	+				-0.3
2,648,043	-				-1.7
2,648,054	+				-0.6
2,648,059	+				-2.0
2,648,080	+				-1.2
2,648,080	+				+0.5
2,648,085	+				-0.3
2,648,086	+				-0.5
2,648,093	-		CCNA_02498	0.11	+0.1
2,648,093	-		CCNA_02498	0.11	-0.5
2,648,093	-		CCNA_02498	0.11	-1.2
2,648,099	-		CCNA_02498	0.12	-2.0
2,648,113	+		CCNA_02498	0.14	-1.1
2,648,126	-		CCNA_02498	0.16	+0.3
2,648,126	-		CCNA_02498	0.16	+0.8
2,648,128	+		CCNA_02498	0.16	-2.8
2,648,128	+		CCNA_02498	0.16	-2.4
2,648,128	+		CCNA_02498	0.16	-0.2
2,648,234	-		CCNA_02498	0.32	-2.1
2,648,236	+		CCNA_02498	0.32	+0.8
2,648,236	+		CCNA_02498	0.32	-0.6
2,648,244	-		CCNA_02498	0.34	-0.4
2,648,262	-		CCNA_02498	0.36	-1.3
2,648,278	-		CCNA_02498	0.39	-0.5
2,648,289	+		CCNA_02498	0.40	+1.3
2,648,297	-		CCNA_02498	0.42	-0.8
2,648,309	+		CCNA_02498	0.44	-0.1
2,648,314	+		CCNA_02498	0.44	-0.9
2,648,314	+		CCNA_02498	0.44	+0.0
2,648,314	+		CCNA_02498	0.44	-0.1
2,648,322	-		CCNA_02498	0.46	-2.0
2,648,328	+		CCNA_02498	0.46	-0.3
2,648,328	+		CCNA_02498	0.46	-1.0
2,648,333	+		CCNA_02498	0.47	+0.7
2,648,333	+		CCNA_02498	0.47	-0.5
2,648,336	-		CCNA_02498	0.48	-0.7
2,648,336	-		CCNA_02498	0.48	-0.4
2,648,336	-		CCNA_02498	0.48	-0.9
2,648,341	-		CCNA_02498	0.48	-0.5
2,648,346	-		CCNA_02498	0.49	-0.1
2,648,350	+		CCNA_02498	0.50	+2.8
2,648,351	-		CCNA_02498	0.50	-2.6
2,648,351	-		CCNA_02498	0.50	+1.4
2,648,380	-		CCNA_02498	0.54	+0.0
2,648,421	+		CCNA_02498	0.61	-0.1
2,648,429	-		CCNA_02498	0.62	-2.6
2,648,437	+		CCNA_02498	0.63	-1.8
2,648,437	+		CCNA_02498	0.63	-1.3
2,648,437	+		CCNA_02498	0.63	+0.5
2,648,437	+		CCNA_02498	0.63	-0.9
2,648,445	-		CCNA_02498	0.64	-2.0
2,648,468	-		CCNA_02498	0.68	-0.8
2,648,509	+		CCNA_02498	0.74	+1.1
2,648,509	+		CCNA_02498	0.74	+1.0
2,648,517	-		CCNA_02498	0.75	-2.6
2,648,517	-		CCNA_02498	0.75	+2.8
2,648,528	-		CCNA_02498	0.77	-1.3
2,648,571	-		CCNA_02498	0.83	-0.6
2,648,591	-		CCNA_02498	0.86	-2.3
2,648,606	-		CCNA_02498	0.89	-1.0
2,648,618	-				-0.1
2,648,618	-				-1.1
2,648,655	-				-0.1
2,648,655	-				-2.0
2,648,673	+				-0.4
2,648,673	+				-0.7
2,648,678	+				+1.7
2,648,686	-				-0.7
2,648,690	+				+0.6
2,648,709	+				+0.3
2,648,719	+				+0.4
2,648,719	+				+1.3
2,648,754	+		CCNA_02499	0.20	-2.7
2,648,754	+		CCNA_02499	0.20	+1.3
2,648,762	-		CCNA_02499	0.22	-0.4
2,648,764	+		CCNA_02499	0.23	-0.8
2,648,764	-		CCNA_02499	0.23	-0.3
2,648,767	-		CCNA_02499	0.24	-1.9
2,648,886	-		CCNA_02499	0.62	-1.3
2,648,913	-		CCNA_02499	0.70	-0.5
2,649,010	+				-0.1
2,649,015	+				-1.2
2,649,016	+				-0.7
2,649,029	-				+0.4
2,649,029	-				-1.4
2,649,036	+		CCNA_02500	0.12	+0.8
2,649,044	-		CCNA_02500	0.14	+0.5
2,649,044	-		CCNA_02500	0.14	-0.8
2,649,069	+		CCNA_02500	0.23	-1.0
2,649,077	-		CCNA_02500	0.26	-1.8
2,649,077	-		CCNA_02500	0.26	-2.2
2,649,077	-		CCNA_02500	0.26	+0.0
2,649,092	-		CCNA_02500	0.31	-1.3
2,649,095	+		CCNA_02500	0.32	-1.3
2,649,158	+		CCNA_02500	0.54	-1.4
2,649,184	-		CCNA_02500	0.64	-0.5
2,649,202	+		CCNA_02500	0.70	-0.5
2,649,202	+		CCNA_02500	0.70	+0.3
2,649,243	-		CCNA_02500	0.84	+0.5
2,649,243	-		CCNA_02500	0.84	-0.6
2,649,256	+		CCNA_02500	0.89	-1.5
2,649,274	-				-1.3
2,649,280	+				-1.0
2,649,281	+				-1.0
2,649,289	-				-0.9
2,649,303	+				-1.3
2,649,303	+				-1.3
2,649,309	+				-2.4
2,649,389	-				-0.3
2,649,404	+				-0.4
2,649,404	+				-2.3
2,649,442	-				-0.5
2,649,459	+				-0.1
2,649,564	-		CCNA_02501	0.12	+0.2
2,649,568	+		CCNA_02501	0.12	-2.3
2,649,568	+		CCNA_02501	0.12	+0.3
2,649,568	+		CCNA_02501	0.12	+0.3
2,649,576	-		CCNA_02501	0.12	-1.7
2,649,576	-		CCNA_02501	0.12	-1.4
2,649,576	-		CCNA_02501	0.12	-1.6
2,649,578	+		CCNA_02501	0.12	+0.2
2,649,578	+		CCNA_02501	0.12	-0.5
2,649,578	+		CCNA_02501	0.12	+0.3
2,649,581	-		CCNA_02501	0.12	-2.9
2,649,590	+		CCNA_02501	0.13	-0.6
2,649,600	-		CCNA_02501	0.13	+0.7
2,649,602	+		CCNA_02501	0.13	-2.9
2,649,602	+		CCNA_02501	0.13	-0.4
2,649,602	+		CCNA_02501	0.13	-0.3
2,649,608	+		CCNA_02501	0.14	+0.4
2,649,613	+		CCNA_02501	0.14	-0.4
2,649,613	+		CCNA_02501	0.14	+0.0
2,649,621	-		CCNA_02501	0.14	-2.9
2,649,621	-		CCNA_02501	0.14	-0.5
2,649,644	-		CCNA_02501	0.15	+1.7
2,649,658	+		CCNA_02501	0.16	-0.4
2,649,658	+		CCNA_02501	0.16	+1.5
2,649,661	+		CCNA_02501	0.16	+0.4
2,649,661	+		CCNA_02501	0.16	-0.3
2,649,663	+		CCNA_02501	0.16	+0.3
2,649,666	-		CCNA_02501	0.16	-0.6
2,649,669	-		CCNA_02501	0.16	-0.4
2,649,671	-		CCNA_02501	0.16	-0.6
2,649,673	+		CCNA_02501	0.16	-1.0
2,649,673	+		CCNA_02501	0.16	-1.3
2,649,676	-		CCNA_02501	0.16	-1.0
2,649,686	+		CCNA_02501	0.17	-1.6
2,649,691	+		CCNA_02501	0.17	-0.4
2,649,691	+		CCNA_02501	0.17	-0.3
2,649,691	+		CCNA_02501	0.17	-1.9
2,649,691	+		CCNA_02501	0.17	+1.1
2,649,691	+		CCNA_02501	0.17	-1.7
2,649,691	+		CCNA_02501	0.17	-2.1
2,649,691	+		CCNA_02501	0.17	-0.6
2,649,691	+		CCNA_02501	0.17	-0.6
2,649,694	-		CCNA_02501	0.17	+0.0
2,649,699	-		CCNA_02501	0.17	-1.5
2,649,699	-		CCNA_02501	0.17	-0.4
2,649,718	+		CCNA_02501	0.18	+0.6
2,649,728	+		CCNA_02501	0.19	-1.0
2,649,728	+		CCNA_02501	0.19	+0.3
2,649,728	+		CCNA_02501	0.19	-2.1
2,649,736	-		CCNA_02501	0.19	-0.5
2,649,751	+		CCNA_02501	0.20	-2.3
2,649,759	-		CCNA_02501	0.20	-0.7
2,649,767	+		CCNA_02501	0.20	-0.8
2,649,775	-		CCNA_02501	0.21	-0.1
2,649,777	+		CCNA_02501	0.21	-0.5
2,649,777	+		CCNA_02501	0.21	+0.2
2,649,800	+		CCNA_02501	0.22	-1.0
2,649,818	-		CCNA_02501	0.22	+0.3
2,649,818	-		CCNA_02501	0.22	-0.8
2,649,833	-		CCNA_02501	0.23	-0.9
2,649,833	-		CCNA_02501	0.23	-1.0
2,649,833	-		CCNA_02501	0.23	+0.2
2,649,858	+		CCNA_02501	0.24	+0.6
2,649,866	-		CCNA_02501	0.24	-1.2
2,649,873	-		CCNA_02501	0.25	-0.4
2,649,889	+		CCNA_02501	0.25	-0.5
2,649,901	+		CCNA_02501	0.26	-0.0
2,649,971	-		CCNA_02501	0.29	+1.7
2,649,971	-		CCNA_02501	0.29	-0.7
2,649,971	-		CCNA_02501	0.29	-0.1
2,649,971	-		CCNA_02501	0.29	-0.7
2,649,978	+		CCNA_02501	0.29	+1.2
2,650,039	+		CCNA_02501	0.32	-1.4
2,650,047	-		CCNA_02501	0.32	-1.4
2,650,061	+		CCNA_02501	0.33	-0.7
2,650,111	-		CCNA_02501	0.35	-1.6
2,650,132	+		CCNA_02501	0.36	-0.5
2,650,156	+		CCNA_02501	0.37	+0.8
2,650,157	+		CCNA_02501	0.37	+0.0
2,650,158	+		CCNA_02501	0.37	-0.6
2,650,158	+		CCNA_02501	0.37	+0.7
2,650,158	+		CCNA_02501	0.37	+0.0
2,650,158	+		CCNA_02501	0.37	+0.6
2,650,163	+		CCNA_02501	0.37	-0.6
2,650,184	+		CCNA_02501	0.38	+0.3
2,650,209	+		CCNA_02501	0.39	+1.2
2,650,216	+		CCNA_02501	0.39	+0.2
2,650,224	-		CCNA_02501	0.39	-0.9
2,650,224	-		CCNA_02501	0.39	-1.4
2,650,259	-		CCNA_02501	0.41	-1.4
2,650,268	+		CCNA_02501	0.41	-0.4
2,650,270	+		CCNA_02501	0.41	-1.1
2,650,276	-		CCNA_02501	0.42	+0.8
2,650,283	-		CCNA_02501	0.42	+2.4
2,650,285	+		CCNA_02501	0.42	+1.1
2,650,285	+		CCNA_02501	0.42	+1.1
2,650,285	+		CCNA_02501	0.42	-1.0