Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00110

Experiment: PYE with Tetracycline 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.00005 mg/ml
119,170	-				+1.1
119,171	-				+0.9
119,173	+				-0.2
119,178	+				-0.3
119,190	-				+0.9
119,191	-				+0.4
119,197	+				-1.0
119,198	+				-1.0
119,207	+				-0.7
119,215	-				-0.7
119,235	-				+1.2
119,239	+				+0.2
119,247	-				+0.7
119,311	+		CCNA_00109	0.17	+0.4
119,337	+		CCNA_00109	0.20	+0.9
119,344	+		CCNA_00109	0.20	-1.1
119,344	+		CCNA_00109	0.20	+1.1
119,344	+		CCNA_00109	0.20	-0.1
119,344	+		CCNA_00109	0.20	-1.8
119,345	-		CCNA_00109	0.21	+0.6
119,345	-		CCNA_00109	0.21	+0.8
119,345	-		CCNA_00109	0.21	+1.3
119,352	-		CCNA_00109	0.21	-0.9
119,352	-		CCNA_00109	0.21	-0.0
119,354	+		CCNA_00109	0.22	-0.5
119,407	-		CCNA_00109	0.27	+0.8
119,439	+		CCNA_00109	0.31	-1.4
119,439	+		CCNA_00109	0.31	-0.5
119,439	+		CCNA_00109	0.31	+0.6
119,439	+		CCNA_00109	0.31	-1.0
119,439	+		CCNA_00109	0.31	-0.7
119,447	-		CCNA_00109	0.32	+2.7
119,447	-		CCNA_00109	0.32	+1.1
119,447	-		CCNA_00109	0.32	+1.3
119,447	-		CCNA_00109	0.32	+1.0
119,466	-		CCNA_00109	0.34	+1.0
119,472	-		CCNA_00109	0.35	+0.4
119,512	-		CCNA_00109	0.39	+0.9
119,536	+		CCNA_00109	0.42	-0.4
119,541	+		CCNA_00109	0.42	-1.2
119,544	-		CCNA_00109	0.43	+0.9
119,564	+		CCNA_00109	0.45	+0.0
119,582	-		CCNA_00109	0.47	+0.8
119,598	+		CCNA_00109	0.49	+2.2
119,604	+		CCNA_00109	0.49	-1.9
119,604	+		CCNA_00109	0.49	+1.8
119,604	+		CCNA_00109	0.49	+0.6
119,612	-		CCNA_00109	0.50	+0.8
119,612	-		CCNA_00109	0.50	+1.8
119,612	-		CCNA_00109	0.50	+0.5
119,612	-		CCNA_00109	0.50	+1.1
119,612	-		CCNA_00109	0.50	+0.4
119,612	-		CCNA_00109	0.50	+0.7
119,643	+		CCNA_00109	0.54	+0.6
119,644	+		CCNA_00109	0.54	-0.5
119,651	-		CCNA_00109	0.55	+0.5
119,720	-		CCNA_00109	0.62	+1.3
119,721	-		CCNA_00109	0.62	+0.7
119,721	-		CCNA_00109	0.62	+0.9
119,758	+		CCNA_00109	0.66	-0.5
119,775	+		CCNA_00109	0.68	-1.0
119,783	-		CCNA_00109	0.69	+0.8
119,783	-		CCNA_00109	0.69	+1.2
119,852	+		CCNA_00109	0.77	+1.7
119,929	+		CCNA_00109	0.85	-1.6
119,942	-		CCNA_00109	0.87	+0.7
120,004	+				-0.3
120,004	+				-1.7
120,012	-				+0.1
120,098	-				+1.8
120,218	-				-1.3
120,225	-		CCNA_00110	0.11	-0.6
120,246	-		CCNA_00110	0.15	-0.3
120,246	-		CCNA_00110	0.15	-1.0
120,246	-		CCNA_00110	0.15	+0.8
120,274	+		CCNA_00110	0.21	+0.4
120,305	+		CCNA_00110	0.27	-0.4
120,317	+		CCNA_00110	0.29	-0.2
120,322	+		CCNA_00110	0.30	-2.7
120,325	-		CCNA_00110	0.31	-1.0
120,353	+		CCNA_00110	0.36	-0.9
120,363	+		CCNA_00110	0.38	-2.1
120,363	+		CCNA_00110	0.38	-1.5
120,363	+		CCNA_00110	0.38	+1.4
120,363	+		CCNA_00110	0.38	-2.0
120,363	+		CCNA_00110	0.38	-1.7
120,371	-		CCNA_00110	0.40	-0.5
120,371	-		CCNA_00110	0.40	-0.7
120,371	-		CCNA_00110	0.40	-1.2
120,371	-		CCNA_00110	0.40	-0.7
120,401	+		CCNA_00110	0.46	-2.2
120,441	-		CCNA_00110	0.54	+0.6
120,503	+		CCNA_00110	0.66	-2.5
120,508	+		CCNA_00110	0.67	+0.6
120,511	-		CCNA_00110	0.67	-2.1
120,511	-		CCNA_00110	0.67	-0.6
120,516	-		CCNA_00110	0.68	-1.5
120,523	-		CCNA_00110	0.70	-0.7
120,537	+		CCNA_00110	0.73	-0.6
120,543	-		CCNA_00110	0.74	-1.4
120,545	-		CCNA_00110	0.74	-1.8
120,566	+		CCNA_00110	0.78	-0.4
120,566	+		CCNA_00110	0.78	-1.8
120,566	+		CCNA_00110	0.78	-2.4
120,566	+		CCNA_00110	0.78	+0.4
120,574	+		CCNA_00110	0.80	+0.6
120,574	-		CCNA_00110	0.80	-2.3
120,610	+		CCNA_00110	0.87	-0.7
120,610	+		CCNA_00110	0.87	-0.6
120,618	-		CCNA_00110	0.89	-1.3
120,618	-		CCNA_00110	0.89	-1.9
120,618	-		CCNA_00110	0.89	+0.4
120,629	+				+0.6
120,657	+				+2.0
120,665	-				-0.7
120,670	-				-2.8
120,682	+				-2.0
120,682	+				-1.4
120,682	+				-1.6
120,690	-				-0.0
120,690	-				+0.4
120,692	+				+1.0
120,692	+				-0.5
120,692	+				+1.4
120,692	+				-0.6
120,700	-				-1.5
120,700	-				+0.1
120,707	+				-0.1
120,715	-				-1.9
120,715	-				-2.0
120,719	+				-2.8
120,755	+				-0.6
120,763	+				+1.7
120,787	+				+2.1
120,844	-		CCNA_00111	0.12	-1.0
120,849	-		CCNA_00111	0.13	-1.9
120,863	+		CCNA_00111	0.15	+0.4
120,870	-		CCNA_00111	0.16	-0.6
120,874	+		CCNA_00111	0.16	-0.2
120,887	+		CCNA_00111	0.18	-0.1
120,899	-		CCNA_00111	0.20	-1.3
120,949	-		CCNA_00111	0.26	-0.1
120,973	+		CCNA_00111	0.30	-0.6
121,001	+		CCNA_00111	0.33	+0.4
121,020	+		CCNA_00111	0.36	+0.1
121,028	-		CCNA_00111	0.37	-0.1
121,028	-		CCNA_00111	0.37	-1.5
121,040	+		CCNA_00111	0.39	+0.7
121,048	+		CCNA_00111	0.40	-0.2
121,048	-		CCNA_00111	0.40	+2.2
121,058	+		CCNA_00111	0.41	+0.6
121,058	+		CCNA_00111	0.41	+1.0
121,066	-		CCNA_00111	0.42	-3.0
121,066	-		CCNA_00111	0.42	-1.3
121,107	-		CCNA_00111	0.48	-1.0
121,210	+		CCNA_00111	0.61	+0.2
121,211	+		CCNA_00111	0.61	-0.4
121,237	+		CCNA_00111	0.65	+0.1
121,238	+		CCNA_00111	0.65	-0.2
121,243	+		CCNA_00111	0.66	-1.7
121,288	+		CCNA_00111	0.72	-0.2
121,288	+		CCNA_00111	0.72	-0.4
121,301	-		CCNA_00111	0.73	-2.9
121,318	+		CCNA_00111	0.76	-0.6
121,318	+		CCNA_00111	0.76	-1.2
121,326	-		CCNA_00111	0.77	-1.0
121,357	+		CCNA_00111	0.81	-1.5
121,368	+		CCNA_00111	0.82	+0.5
121,387	+		CCNA_00111	0.85	-0.2
121,412	+		CCNA_00111	0.88	-0.9
121,412	+		CCNA_00111	0.88	+0.6
121,420	-		CCNA_00111	0.89	-1.6
121,429	+				-1.8
121,471	+				-0.6
121,479	-				-0.5
121,487	+				+0.5
121,493	+				+0.3
121,494	-				-1.4
121,522	-				-0.4
121,557	+		CCNA_00112	0.14	+0.5
121,557	-		CCNA_00112	0.14	-2.0
121,558	-		CCNA_00112	0.14	+0.3
121,558	-		CCNA_00112	0.14	-0.7
121,582	-		CCNA_00112	0.20	-0.2
121,601	+		CCNA_00112	0.25	+0.2
121,667	+		CCNA_00112	0.42	-0.9
121,675	-		CCNA_00112	0.44	-2.3