Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00061

Experiment: PYE with Tetracycline 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.00005 mg/ml
60,887	+		CCNA_00059	0.60	-1.2
60,916	-		CCNA_00059	0.65	+0.7
60,966	-		CCNA_00059	0.73	-1.1
60,976	-		CCNA_00059	0.75	+0.5
61,000	+		CCNA_00059	0.79	+0.4
61,000	+		CCNA_00059	0.79	+0.5
61,000	+		CCNA_00059	0.79	-3.0
61,008	-		CCNA_00059	0.81	+0.3
61,008	-		CCNA_00059	0.81	+0.8
61,008	-		CCNA_00059	0.81	+1.0
61,076	-				+0.6
61,089	-				+0.5
61,175	+				-0.6
61,189	+				-0.1
61,196	-				+0.6
61,196	-				+0.9
61,754	+				+2.1
61,754	+				-1.1
61,754	+				-3.1
61,754	+				+1.0
61,754	+				-2.0
61,754	+				-0.4
61,762	-				+0.1
61,762	-				+0.6
61,762	-				-0.8
61,762	-				+0.4
61,762	-				+0.7
61,770	+				+1.4
61,796	-				-0.3
61,870	-				-0.5
61,904	+				-1.9
61,905	+				-0.6
61,912	-				+0.1
61,913	-				-2.3
61,913	-				-1.5
61,929	+				-0.0
61,929	+				-1.4
61,929	+				-1.6
61,931	-				+0.6
61,937	-				-1.4
61,937	-				-0.7
61,942	-				-0.7
61,942	-				+0.0
61,953	+				+0.8
61,977	+				-1.6
61,977	+				-2.5
61,985	-				-1.5
61,985	-				+0.6
61,985	-				-1.9
61,986	-				-1.4
61,993	+				-0.0
62,048	+		CCNA_00061	0.13	-1.4
62,048	-		CCNA_00061	0.13	-0.7
62,058	+		CCNA_00061	0.14	-3.3
62,059	-		CCNA_00061	0.14	-2.1
62,070	-		CCNA_00061	0.15	-0.6
62,092	+		CCNA_00061	0.16	-1.7
62,094	+		CCNA_00061	0.16	+0.4
62,124	-		CCNA_00061	0.19	-0.6
62,140	+		CCNA_00061	0.20	-2.4
62,176	+		CCNA_00061	0.23	+0.1
62,185	-		CCNA_00061	0.24	-0.5
62,208	-		CCNA_00061	0.25	-0.7
62,281	+		CCNA_00061	0.31	-2.5
62,281	-		CCNA_00061	0.31	-0.0
62,301	+		CCNA_00061	0.33	-1.0
62,306	-		CCNA_00061	0.33	-0.9
62,306	-		CCNA_00061	0.33	-1.1
62,363	-		CCNA_00061	0.38	-3.3
62,375	+		CCNA_00061	0.39	-0.0
62,411	-		CCNA_00061	0.41	-0.7
62,425	+		CCNA_00061	0.43	-0.0
62,435	+		CCNA_00061	0.43	-3.1
62,435	+		CCNA_00061	0.43	+0.7
62,443	-		CCNA_00061	0.44	-2.5
62,443	-		CCNA_00061	0.44	-0.6
62,443	-		CCNA_00061	0.44	-0.5
62,443	-		CCNA_00061	0.44	+0.3
62,458	+		CCNA_00061	0.45	-1.9
62,476	-		CCNA_00061	0.47	-1.7
62,505	+		CCNA_00061	0.49	-2.2
62,563	-		CCNA_00061	0.53	+0.4
62,589	+		CCNA_00061	0.55	+0.6
62,630	-		CCNA_00061	0.59	-0.4
62,683	-		CCNA_00061	0.63	+0.6
62,699	+		CCNA_00061	0.64	+1.0
62,706	-		CCNA_00061	0.65	-1.1
62,707	-		CCNA_00061	0.65	-0.6
62,707	-		CCNA_00061	0.65	-0.6
62,709	+		CCNA_00061	0.65	-0.3
62,717	-		CCNA_00061	0.66	-0.5
62,717	-		CCNA_00061	0.66	-2.3
62,717	-		CCNA_00061	0.66	-0.1
62,729	+		CCNA_00061	0.67	+0.3
62,736	+		CCNA_00061	0.67	+0.8
62,737	-		CCNA_00061	0.67	-0.9
62,742	+		CCNA_00061	0.68	-2.6
62,747	+		CCNA_00061	0.68	-2.0
62,795	+		CCNA_00061	0.72	+1.3
62,805	-		CCNA_00061	0.72	+1.1
62,870	+		CCNA_00061	0.78	+0.8
62,892	+		CCNA_00061	0.79	-1.5
62,931	+		CCNA_00061	0.82	-0.6
62,939	-		CCNA_00061	0.83	-0.5
62,939	-		CCNA_00061	0.83	-0.9
62,946	+		CCNA_00061	0.84	-2.6
62,946	+		CCNA_00061	0.84	+0.2
62,993	+		CCNA_00061	0.87	+0.6
63,021	+		CCNA_00061	0.90	-2.0
63,022	-		CCNA_00061	0.90	-0.5
63,029	-				-0.3
63,029	-				-1.0
63,070	-				+1.5
63,081	+				-0.1
63,081	+				+0.1
63,081	+				+0.3
63,090	+				+0.3
63,147	+				+1.6
63,147	+				+0.6
63,147	+				+1.0
63,147	+				+0.4
63,155	-				-0.4
63,155	-				-0.7
63,157	+				+0.0
63,189	-				+0.5
63,198	+				-1.0
63,198	+				+0.4
63,198	+				-0.1
63,198	+				+0.1
63,206	-				+1.3
63,239	-				+1.7
63,276	-				+1.0
63,299	-				+1.6
63,327	-				+1.0