Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS19375

Experiment: Recovery broth with Vancomycin from Streptomyces orientalis 1e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Vancomycin from Streptomyces orientalis 1e-04 mM
2,127,912	+				+0.5
2,127,977	+				-0.4
2,127,979	+				+0.5
2,128,188	+				+0.9
2,128,213	-				+1.3
2,128,283	-				-1.2
2,128,469	-				-1.2
2,128,523	-				-0.9
2,128,773	-				-0.2
2,129,021	-		BBR_RS19375	0.15	+1.8
2,129,086	+		BBR_RS19375	0.19	+1.5
2,129,677	+		BBR_RS19375	0.55	+0.9
2,129,925	+		BBR_RS19375	0.70	+1.2
2,130,337	-				-0.2
2,130,343	-				+0.3
2,130,346	-				-0.2
2,130,346	-				-0.5
2,130,418	-				+0.9
2,130,427	-				+0.1
2,130,432	+				+0.2
2,130,433	-				-0.5
2,130,440	-				+0.1
2,130,440	-				+0.7
2,130,458	-				-0.1
2,130,462	-				+0.3
2,131,216	+		BBR_RS19380	0.43	-0.3
2,131,305	-		BBR_RS19380	0.48	+0.7