Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2456

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
2,533,183	-	apt	Synpcc7942_2454	0.85	-2.0
2,533,185	+	apt	Synpcc7942_2454	0.85	-1.3
2,533,188	-	apt	Synpcc7942_2454	0.85	-2.9
2,533,195	-	apt	Synpcc7942_2454	0.86	+1.0
2,533,199	-	apt	Synpcc7942_2454	0.86	+1.2
2,533,238	+	apt	Synpcc7942_2454	0.89	+0.7
2,533,238	-	apt	Synpcc7942_2454	0.89	-2.6
2,533,280	+				+0.1
2,533,280	+				+1.0
2,533,282	-				-1.0
2,533,291	+				-0.2
2,533,299	-				+0.5
2,533,301	+				+2.0
2,533,301	+				+1.0
2,533,301	+				-0.0
2,533,304	+				+1.2
2,533,307	-				+1.5
2,533,373	+				+1.0
2,533,408	-				-0.0
2,533,408	-				-1.6
2,533,408	-				+1.5
2,533,433	+				+1.8
2,533,565	-				+2.0
2,533,582	-				+2.3
2,534,150	+				+0.1
2,534,738	+		Synpcc7942_2456	0.59	-0.0
2,534,738	+		Synpcc7942_2456	0.59	-1.0
2,534,738	+		Synpcc7942_2456	0.59	+1.5
2,534,738	+		Synpcc7942_2456	0.59	+1.0
2,534,738	+		Synpcc7942_2456	0.59	+0.6
2,534,738	+		Synpcc7942_2456	0.59	+2.0
2,534,746	-		Synpcc7942_2456	0.60	+0.5
2,534,746	-		Synpcc7942_2456	0.60	+0.6
2,534,756	-		Synpcc7942_2456	0.61	-0.6
2,534,758	+		Synpcc7942_2456	0.61	+0.5
2,534,758	+		Synpcc7942_2456	0.61	+0.4
2,534,793	+		Synpcc7942_2456	0.65	+2.8
2,534,839	+		Synpcc7942_2456	0.70	+1.5
2,534,847	-		Synpcc7942_2456	0.71	+1.0
2,534,852	+		Synpcc7942_2456	0.71	+6.1
2,534,854	+		Synpcc7942_2456	0.71	-1.6
2,534,857	-		Synpcc7942_2456	0.72	-1.0
2,534,882	+		Synpcc7942_2456	0.74	+1.4
2,534,882	-		Synpcc7942_2456	0.74	+0.1
2,534,921	-		Synpcc7942_2456	0.78	-0.0
2,534,921	-		Synpcc7942_2456	0.78	+2.3
2,534,943	+		Synpcc7942_2456	0.81	+1.0
2,535,009	+		Synpcc7942_2456	0.88	+2.3
2,535,011	+		Synpcc7942_2456	0.88	-0.0
2,535,017	-		Synpcc7942_2456	0.89	-0.0
2,535,019	-		Synpcc7942_2456	0.89	+1.5
2,535,019	-		Synpcc7942_2456	0.89	-0.5
2,535,030	+		Synpcc7942_2456	0.90	-0.5
2,535,030	+		Synpcc7942_2456	0.90	-1.6
2,535,036	+				+2.0
2,535,049	-				-0.9
2,535,050	-				-1.0
2,535,051	-				+1.5
2,535,063	+				+1.3
2,535,084	+				+0.5
2,535,084	+				+1.4
2,535,097	-				+0.8
2,535,168	-				+1.0
2,535,199	-				-2.6
2,536,113	+				+1.0
2,536,113	+				+1.3