Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2368

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
2,432,908	+				-0.4
2,432,908	+				-0.0
2,432,910	+				+1.4
2,432,916	-				-2.0
2,432,956	+				-1.0
2,432,964	-				-0.8
2,432,964	-				-0.8
2,432,964	-				+1.0
2,432,964	-				+1.3
2,432,985	+				+2.1
2,432,985	+				-0.7
2,433,019	+		Synpcc7942_2367	0.13	-1.0
2,433,034	-		Synpcc7942_2367	0.16	+2.6
2,433,053	+		Synpcc7942_2367	0.20	-1.0
2,433,053	-		Synpcc7942_2367	0.20	-2.4
2,433,059	-		Synpcc7942_2367	0.21	-1.4
2,433,059	-		Synpcc7942_2367	0.21	-2.0
2,433,066	-		Synpcc7942_2367	0.23	+1.0
2,433,079	+				+1.6
2,433,080	+		Synpcc7942_2367	0.26	-2.0
2,433,117	+				-1.0
2,433,138	+		Synpcc7942_2367	0.37	-0.2
2,433,143	+		Synpcc7942_2367	0.38	-1.0
2,433,151	-		Synpcc7942_2367	0.40	-0.3
2,433,151	-		Synpcc7942_2367	0.40	+1.0
2,433,194	+		Synpcc7942_2367	0.48	-0.0
2,433,194	+		Synpcc7942_2367	0.48	-2.7
2,433,220	+		Synpcc7942_2367	0.53	+0.7
2,433,220	+		Synpcc7942_2367	0.53	-0.2
2,433,228	-		Synpcc7942_2367	0.55	-1.6
2,433,228	-		Synpcc7942_2367	0.55	+0.4
2,433,228	-		Synpcc7942_2367	0.55	+0.2
2,433,245	+		Synpcc7942_2367	0.58	-0.0
2,433,329	+		Synpcc7942_2367	0.75	-0.6
2,433,329	+		Synpcc7942_2367	0.75	-2.0
2,433,337	-		Synpcc7942_2367	0.77	-0.4
2,433,343	-		Synpcc7942_2367	0.78	-0.4
2,433,343	-		Synpcc7942_2367	0.78	-1.6
2,433,355	+		Synpcc7942_2367	0.80	-1.6
2,433,358	-		Synpcc7942_2367	0.81	-1.0
2,433,395	+		Synpcc7942_2367	0.88	-0.6
2,433,443	-				-2.5
2,433,479	-				-2.0
2,433,632	-				-2.5
2,433,651	-				-0.0
2,433,707	+				-0.0
2,433,715	-				-1.0
2,433,717	+				+1.0
2,433,755	+				-1.8
2,433,755	+				-0.0
2,433,755	+				-2.6
2,433,762	-				-0.3
2,433,763	-				-2.0
2,433,763	-				-0.0
2,433,763	-				-0.0
2,433,765	+				-1.6
2,433,765	+				-1.0
2,433,765	+				-1.0
2,433,765	+				-2.2
2,433,765	+				-1.6
2,433,765	+				-0.0
2,433,765	+				+1.6
2,433,765	+				-1.0
2,433,765	+				+0.2
2,433,765	+				-1.0
2,433,765	+				-1.4
2,433,765	+				+1.0
2,433,765	+				+1.6
2,433,765	+				-0.0
2,433,765	+				-2.0
2,433,765	+				-1.6
2,433,765	+				-2.4
2,433,765	+				-1.6
2,433,765	+				-0.8
2,433,765	+				-1.3
2,433,765	+				-1.0
2,433,767	+				-2.0
2,433,767	+				-2.0
2,433,767	+				-0.0
2,433,773	-				+0.4
2,433,773	-				-2.8
2,433,773	-				-1.0
2,433,773	-				+0.0
2,433,773	-				-1.6
2,433,773	-				-2.4
2,433,773	-				-0.0
2,433,773	-				-0.0
2,433,773	-				+0.6
2,433,773	-				-1.0
2,433,773	-				+1.0
2,433,773	-				-1.6
2,433,773	-				-1.6
2,433,773	-				-1.6
2,433,773	-				-1.0
2,433,773	-				+0.6
2,433,773	-				-0.0
2,433,773	-				-2.6
2,433,773	-				-2.6
2,433,773	-				-0.3
2,433,773	-				-2.0
2,433,775	-				-2.0
2,433,797	-				+3.2
2,433,819	+				-1.6
2,433,867	-				-3.5
2,433,869	-				-2.7
2,433,875	+				-1.0
2,433,875	+				-0.0
2,433,880	+				-2.4
2,433,883	-				-0.0
2,433,896	+				+1.0
2,433,898	+				-1.0
2,433,906	-				-0.0
2,433,906	-				-2.6
2,433,928	+				-3.4
2,433,950	+				-2.8
2,433,977	+				-1.6
2,434,003	-		Synpcc7942_2368	0.10	-0.0
2,434,058	-		Synpcc7942_2368	0.15	-1.6
2,434,103	-		Synpcc7942_2368	0.19	-1.6
2,434,151	+		Synpcc7942_2368	0.23	-1.6
2,434,273	-		Synpcc7942_2368	0.34	-0.0
2,434,302	+		Synpcc7942_2368	0.36	-1.6
2,434,326	+		Synpcc7942_2368	0.39	-1.0
2,434,348	+		Synpcc7942_2368	0.40	-1.6
2,434,356	-		Synpcc7942_2368	0.41	-1.6
2,434,367	-		Synpcc7942_2368	0.42	-0.0
2,434,369	+		Synpcc7942_2368	0.42	-2.4
2,434,377	-		Synpcc7942_2368	0.43	-2.0
2,434,377	-		Synpcc7942_2368	0.43	-1.6
2,434,377	-		Synpcc7942_2368	0.43	-1.6
2,434,417	+		Synpcc7942_2368	0.47	-3.0
2,434,425	-		Synpcc7942_2368	0.47	-2.0
2,434,504	+		Synpcc7942_2368	0.54	-1.0
2,434,799	+		Synpcc7942_2368	0.80	-3.7
2,434,799	+		Synpcc7942_2368	0.80	-2.8
2,434,799	+		Synpcc7942_2368	0.80	-0.0
2,434,807	-		Synpcc7942_2368	0.81	-1.0
2,434,807	-		Synpcc7942_2368	0.81	-1.6
2,434,807	-		Synpcc7942_2368	0.81	-0.0
2,434,856	-		Synpcc7942_2368	0.85	-0.0
2,434,925	+				-2.0
2,434,933	-				-2.0
2,434,986	+				-3.6
2,435,033	-				-3.0
2,435,080	+				-1.6
2,435,161	+				-0.0
2,435,194	+				-0.0
2,435,272	-				-2.0
2,435,353	-				-3.0
2,435,411	-	acrF	Synpcc7942_2369	0.12	-2.0
2,435,411	-	acrF	Synpcc7942_2369	0.12	-2.0
2,435,426	+	acrF	Synpcc7942_2369	0.12	-0.0
2,435,525	-	acrF	Synpcc7942_2369	0.15	-3.0
2,435,666	+	acrF	Synpcc7942_2369	0.20	-0.0
2,435,778	-	acrF	Synpcc7942_2369	0.23	-2.0
2,435,828	+	acrF	Synpcc7942_2369	0.25	-0.0
2,435,841	+	acrF	Synpcc7942_2369	0.25	-3.2
2,435,849	-	acrF	Synpcc7942_2369	0.25	-1.0
2,435,872	+	acrF	Synpcc7942_2369	0.26	-1.0
2,435,880	-	acrF	Synpcc7942_2369	0.26	+1.0
2,435,954	+	acrF	Synpcc7942_2369	0.29	-2.8
2,435,960	-	acrF	Synpcc7942_2369	0.29	-1.6
2,435,983	-	acrF	Synpcc7942_2369	0.30	-1.0
2,436,014	-	acrF	Synpcc7942_2369	0.31	-2.8