Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2354

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
2,420,231	+				+0.3
2,420,309	+				+1.0
2,420,386	+				-1.1
2,421,141	+				+2.8
2,421,182	+				+2.0
2,421,187	+				+1.0
2,421,199	+				-0.0
2,421,204	+				-0.6
2,421,207	-				-1.0
2,421,264	+	ytfC	Synpcc7942_2354	0.12	-0.4
2,421,269	+	ytfC	Synpcc7942_2354	0.13	-0.0
2,421,281	+	ytfC	Synpcc7942_2354	0.15	-0.0
2,421,281	+	ytfC	Synpcc7942_2354	0.15	-1.6
2,421,327	+	ytfC	Synpcc7942_2354	0.24	+0.2
2,421,335	-	ytfC	Synpcc7942_2354	0.25	-1.0
2,421,345	+	ytfC	Synpcc7942_2354	0.27	-2.0
2,421,348	+	ytfC	Synpcc7942_2354	0.28	-1.2
2,421,364	-	ytfC	Synpcc7942_2354	0.31	-0.3
2,421,369	+	ytfC	Synpcc7942_2354	0.32	+1.0
2,421,408	+	ytfC	Synpcc7942_2354	0.39	-0.4
2,421,418	+	ytfC	Synpcc7942_2354	0.41	-0.0
2,421,418	+	ytfC	Synpcc7942_2354	0.41	-1.0
2,421,424	-	ytfC	Synpcc7942_2354	0.42	-2.0
2,421,435	+	ytfC	Synpcc7942_2354	0.44	-1.4
2,421,435	+	ytfC	Synpcc7942_2354	0.44	+1.0
2,421,446	+	ytfC	Synpcc7942_2354	0.46	-1.6
2,421,457	-	ytfC	Synpcc7942_2354	0.49	-1.6
2,421,466	+	ytfC	Synpcc7942_2354	0.50	-2.0
2,421,537	+	ytfC	Synpcc7942_2354	0.64	-0.6
2,421,597	+	ytfC	Synpcc7942_2354	0.75	+1.5
2,421,612	+	ytfC	Synpcc7942_2354	0.78	+0.5
2,421,617	+	ytfC	Synpcc7942_2354	0.79	-1.6
2,421,620	-	ytfC	Synpcc7942_2354	0.80	-2.0
2,421,649	-	ytfC	Synpcc7942_2354	0.85	-2.8
2,421,658	+	ytfC	Synpcc7942_2354	0.87	-0.0
2,421,666	-	ytfC	Synpcc7942_2354	0.88	+1.1
2,421,666	-	ytfC	Synpcc7942_2354	0.88	-2.6
2,421,666	-	ytfC	Synpcc7942_2354	0.88	-1.0
2,421,686	-				+1.0
2,421,728	+				-0.0
2,421,736	-				-1.6
2,421,768	-				-2.6
2,421,772	+				-0.0
2,421,772	+				+1.3
2,421,796	+				+0.7
2,421,797	+				+0.4
2,421,804	-				-0.5
2,421,804	-				+0.7
2,421,804	-				-1.0
2,421,824	-		Synpcc7942_2355	0.14	-0.0
2,421,839	-		Synpcc7942_2355	0.19	+0.6
2,421,861	-		Synpcc7942_2355	0.25	+1.9
2,421,866	+		Synpcc7942_2355	0.27	-3.9
2,421,936	+		Synpcc7942_2355	0.48	-0.0
2,421,936	+		Synpcc7942_2355	0.48	-2.4
2,421,963	-		Synpcc7942_2355	0.57	-0.0
2,421,969	+		Synpcc7942_2355	0.59	-0.0
2,421,991	+		Synpcc7942_2355	0.65	-0.3
2,422,007	-		Synpcc7942_2355	0.70	+1.1
2,422,012	+		Synpcc7942_2355	0.72	-0.0
2,422,014	+		Synpcc7942_2355	0.73	-1.6
2,422,022	-		Synpcc7942_2355	0.75	-1.0
2,422,022	-		Synpcc7942_2355	0.75	+1.0
2,422,031	+		Synpcc7942_2355	0.78	+1.8
2,422,050	+		Synpcc7942_2355	0.84	+0.7
2,422,075	-				-0.0
2,422,099	+				-1.4
2,422,113	-				+1.4
2,422,115	+				+0.4
2,422,127	+				+2.1
2,422,142	+				-1.3
2,422,152	+				+0.4
2,422,152	+				+0.9
2,422,152	+				+1.1
2,422,152	+				-1.3
2,422,152	+				+2.0
2,422,152	+				+0.3
2,422,152	+				-0.0
2,422,160	-				+0.6
2,422,160	-				-2.0
2,422,160	-				+0.8
2,422,160	-				+0.4
2,422,160	-				+2.0
2,422,160	-				+0.5
2,422,160	-				+0.4
2,422,160	-				+2.3
2,422,170	-				-0.0
2,422,170	-				+0.2
2,422,170	-				-1.0
2,422,171	+				-0.0
2,422,185	-				+0.5
2,422,185	-				-0.5
2,422,185	-				+2.0
2,422,191	+				+0.5
2,422,196	-				+0.5
2,422,203	+				+0.5
2,422,213	-				+2.0
2,422,215	+				-0.0
2,422,223	-				+1.0
2,422,282	-		Synpcc7942_2356	0.14	-0.0
2,422,315	+		Synpcc7942_2356	0.19	+1.0
2,422,320	-		Synpcc7942_2356	0.20	-2.8
2,422,321	-		Synpcc7942_2356	0.20	-1.8
2,422,321	-		Synpcc7942_2356	0.20	-0.6
2,422,327	+		Synpcc7942_2356	0.21	-0.0
2,422,342	-		Synpcc7942_2356	0.24	-0.0
2,422,342	-		Synpcc7942_2356	0.24	+2.3
2,422,348	-		Synpcc7942_2356	0.25	-0.2
2,422,406	+		Synpcc7942_2356	0.34	+2.3
2,422,426	-		Synpcc7942_2356	0.37	+0.5
2,422,426	-		Synpcc7942_2356	0.37	+1.0
2,422,530	-		Synpcc7942_2356	0.54	-0.6
2,422,561	-		Synpcc7942_2356	0.59	-1.0
2,422,575	+		Synpcc7942_2356	0.61	+0.3
2,422,575	+		Synpcc7942_2356	0.61	+0.4
2,422,575	+		Synpcc7942_2356	0.61	-2.6
2,422,575	+		Synpcc7942_2356	0.61	-0.0
2,422,580	+		Synpcc7942_2356	0.62	-0.0
2,422,583	-		Synpcc7942_2356	0.62	+0.7
2,422,583	-		Synpcc7942_2356	0.62	-1.6
2,422,585	+		Synpcc7942_2356	0.63	-0.0
2,422,588	-		Synpcc7942_2356	0.63	+1.0
2,422,588	-		Synpcc7942_2356	0.63	+0.8
2,422,641	+		Synpcc7942_2356	0.71	-0.0
2,422,658	+		Synpcc7942_2356	0.74	-2.0
2,422,658	+		Synpcc7942_2356	0.74	+1.1
2,422,663	+		Synpcc7942_2356	0.75	+0.6
2,422,663	+		Synpcc7942_2356	0.75	+3.0
2,422,671	-		Synpcc7942_2356	0.76	+0.4
2,422,671	-		Synpcc7942_2356	0.76	+1.0
2,422,713	-		Synpcc7942_2356	0.83	-0.8