Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2104

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
2,183,740	-				+0.5
2,183,746	+				-1.1
2,183,754	-				+0.9
2,183,763	+				+0.3
2,183,771	-				+0.5
2,183,804	-				-0.5
2,183,813	-				+0.6
2,183,827	-				+1.3
2,183,841	+				+1.9
2,183,849	+				-1.1
2,183,849	-				+1.4
2,183,862	+		Synpcc7942_2102	0.10	+1.5
2,183,897	+		Synpcc7942_2102	0.25	+0.2
2,183,905	-		Synpcc7942_2102	0.28	+3.4
2,183,905	-		Synpcc7942_2102	0.28	+2.0
2,183,905	-		Synpcc7942_2102	0.28	+1.1
2,183,905	-		Synpcc7942_2102	0.28	+2.2
2,183,924	+		Synpcc7942_2102	0.36	+1.2
2,183,932	-		Synpcc7942_2102	0.40	-1.3
2,183,946	+		Synpcc7942_2102	0.45	+2.2
2,183,958	+		Synpcc7942_2102	0.50	-1.3
2,183,962	-		Synpcc7942_2102	0.52	+0.4
2,183,966	-		Synpcc7942_2102	0.54	+1.5
2,183,996	+		Synpcc7942_2102	0.66	+0.7
2,184,034	+		Synpcc7942_2102	0.82	+0.7
2,184,035	+		Synpcc7942_2102	0.82	+0.5
2,184,076	+				-0.9
2,184,097	-				+2.2
2,184,141	+				+1.5
2,184,168	+		Synpcc7942_2103	0.12	-0.3
2,184,170	-		Synpcc7942_2103	0.13	-0.1
2,184,176	-		Synpcc7942_2103	0.14	+1.5
2,184,186	-		Synpcc7942_2103	0.17	+0.3
2,184,225	-		Synpcc7942_2103	0.26	+1.9
2,184,305	-		Synpcc7942_2103	0.46	+0.5
2,184,324	+		Synpcc7942_2103	0.51	-1.1
2,184,335	+		Synpcc7942_2103	0.53	-1.2
2,184,345	+		Synpcc7942_2103	0.56	+0.7
2,184,353	+		Synpcc7942_2103	0.58	+0.7
2,184,408	-		Synpcc7942_2103	0.71	-2.1
2,184,426	+		Synpcc7942_2103	0.76	-0.6
2,184,434	-		Synpcc7942_2103	0.78	+0.8
2,184,468	-		Synpcc7942_2103	0.86	+1.3
2,184,518	+				+1.2
2,184,528	-				+4.8
2,184,562	+				+1.4
2,184,576	-				-0.1
2,184,604	+				+0.9
2,184,606	+				+0.9
2,184,606	+				+2.2
2,184,607	-				+1.2
2,184,612	-				-1.4
2,184,624	-				+0.9
2,184,624	-				+0.9
2,184,631	+				-1.1
2,184,634	-				-0.1
2,184,639	-				-0.2
2,184,696	+				+1.5
2,184,764	-				+0.9
2,184,764	-				+1.1
2,184,795	+	cynS	Synpcc7942_2104	0.12	-0.1
2,184,893	+	cynS	Synpcc7942_2104	0.35	+0.5
2,184,894	+	cynS	Synpcc7942_2104	0.35	-0.1
2,184,894	+	cynS	Synpcc7942_2104	0.35	+2.2
2,184,902	-	cynS	Synpcc7942_2104	0.37	+1.4
2,184,962	+	cynS	Synpcc7942_2104	0.50	-0.1
2,184,971	-	cynS	Synpcc7942_2104	0.52	+0.7
2,184,986	+	cynS	Synpcc7942_2104	0.56	+0.1
2,185,001	-	cynS	Synpcc7942_2104	0.59	+0.5
2,185,010	+	cynS	Synpcc7942_2104	0.61	-2.1
2,185,188	+				+0.4
2,185,190	+				-0.7
2,185,298	-	cynD	Synpcc7942_2105	0.12	-1.4
2,185,312	+	cynD	Synpcc7942_2105	0.14	-0.1
2,185,361	+	cynD	Synpcc7942_2105	0.20	+0.9
2,185,385	+	cynD	Synpcc7942_2105	0.22	-0.1
2,185,388	-	cynD	Synpcc7942_2105	0.23	+0.9
2,185,399	-	cynD	Synpcc7942_2105	0.24	+0.2
2,185,420	-	cynD	Synpcc7942_2105	0.26	-0.3
2,185,468	+	cynD	Synpcc7942_2105	0.32	-0.1
2,185,473	+	cynD	Synpcc7942_2105	0.32	+2.2
2,185,491	+	cynD	Synpcc7942_2105	0.34	-1.1
2,185,525	-	cynD	Synpcc7942_2105	0.38	+2.5
2,185,535	+	cynD	Synpcc7942_2105	0.40	-1.1
2,185,535	+	cynD	Synpcc7942_2105	0.40	-0.4
2,185,535	+	cynD	Synpcc7942_2105	0.40	+0.7
2,185,543	-	cynD	Synpcc7942_2105	0.40	-3.1
2,185,543	-	cynD	Synpcc7942_2105	0.40	-0.1
2,185,559	+	cynD	Synpcc7942_2105	0.42	+1.1
2,185,567	-				+0.9
2,185,569	-	cynD	Synpcc7942_2105	0.43	+1.9
2,185,608	-	cynD	Synpcc7942_2105	0.48	+0.3
2,185,614	-	cynD	Synpcc7942_2105	0.49	+1.2
2,185,619	+	cynD	Synpcc7942_2105	0.49	+1.5
2,185,620	+	cynD	Synpcc7942_2105	0.49	+0.9
2,185,627	-	cynD	Synpcc7942_2105	0.50	-0.1
2,185,664	+	cynD	Synpcc7942_2105	0.54	+1.5
2,185,664	+	cynD	Synpcc7942_2105	0.54	+1.7
2,185,672	-	cynD	Synpcc7942_2105	0.55	-0.1
2,185,672	-	cynD	Synpcc7942_2105	0.55	-0.1
2,185,672	-	cynD	Synpcc7942_2105	0.55	+2.5
2,185,672	-	cynD	Synpcc7942_2105	0.55	+0.4
2,185,735	-	cynD	Synpcc7942_2105	0.63	-0.1
2,185,761	-	cynD	Synpcc7942_2105	0.66	-2.4
2,185,776	+	cynD	Synpcc7942_2105	0.67	+3.8
2,185,842	+	cynD	Synpcc7942_2105	0.75	-1.7
2,186,024	-				+0.2
2,186,116	-				+1.9