Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1945

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
2,019,418	+				-0.1
2,019,447	+				-0.5
2,019,666	+				+0.9
2,019,697	-	uvrC	Synpcc7942_1945	0.10	-2.1
2,019,763	-	uvrC	Synpcc7942_1945	0.14	-2.7
2,019,789	-	uvrC	Synpcc7942_1945	0.15	-1.7
2,019,856	-	uvrC	Synpcc7942_1945	0.19	-1.7
2,019,895	+	uvrC	Synpcc7942_1945	0.21	-2.1
2,019,903	-	uvrC	Synpcc7942_1945	0.21	-2.4
2,020,063	-	uvrC	Synpcc7942_1945	0.29	-1.1
2,020,077	+	uvrC	Synpcc7942_1945	0.30	-0.1
2,020,287	+	uvrC	Synpcc7942_1945	0.41	-0.1
2,020,287	-	uvrC	Synpcc7942_1945	0.41	-0.1
2,020,289	+	uvrC	Synpcc7942_1945	0.41	-0.1
2,020,302	-	uvrC	Synpcc7942_1945	0.42	-2.4
2,020,315	+	uvrC	Synpcc7942_1945	0.42	-0.9
2,020,353	-	uvrC	Synpcc7942_1945	0.44	-3.0
2,020,490	-	uvrC	Synpcc7942_1945	0.51	-1.1
2,020,491	-	uvrC	Synpcc7942_1945	0.51	-0.1
2,020,504	+	uvrC	Synpcc7942_1945	0.52	-2.7
2,020,508	+	uvrC	Synpcc7942_1945	0.52	-1.1
2,020,517	+	uvrC	Synpcc7942_1945	0.53	-1.1
2,020,525	+	uvrC	Synpcc7942_1945	0.53	+1.9
2,020,584	-	uvrC	Synpcc7942_1945	0.56	-0.1
2,020,590	+				-0.1
2,020,617	-	uvrC	Synpcc7942_1945	0.58	-1.1
2,020,618	-	uvrC	Synpcc7942_1945	0.58	-1.1
2,020,651	-	uvrC	Synpcc7942_1945	0.60	-0.1
2,020,662	-	uvrC	Synpcc7942_1945	0.60	-0.1
2,020,679	+	uvrC	Synpcc7942_1945	0.61	-0.1
2,020,688	+	uvrC	Synpcc7942_1945	0.62	-0.1
2,020,781	+	uvrC	Synpcc7942_1945	0.66	+0.9
2,020,826	-	uvrC	Synpcc7942_1945	0.69	-2.2
2,020,828	+	uvrC	Synpcc7942_1945	0.69	-1.1
2,020,876	-	uvrC	Synpcc7942_1945	0.71	-1.1
2,020,909	+	uvrC	Synpcc7942_1945	0.73	+0.9
2,020,930	-	uvrC	Synpcc7942_1945	0.74	-3.1
2,020,953	-	uvrC	Synpcc7942_1945	0.75	-0.1
2,020,977	+	uvrC	Synpcc7942_1945	0.77	-0.1
2,021,010	-	uvrC	Synpcc7942_1945	0.78	-2.4
2,021,115	-	uvrC	Synpcc7942_1945	0.84	-1.7
2,021,200	-	uvrC	Synpcc7942_1945	0.88	-1.1
2,021,397	+				-0.1
2,021,400	+				+0.5
2,021,483	+				+0.7
2,021,483	+				-1.5
2,021,490	+				+1.9
2,021,491	-				-0.1
2,021,496	-				-0.1
2,021,498	-				+3.5
2,021,584	+		Synpcc7942_1946	0.19	-1.1
2,021,633	-		Synpcc7942_1946	0.29	+0.1
2,021,641	+		Synpcc7942_1946	0.31	-0.1
2,021,644	-		Synpcc7942_1946	0.31	+1.2
2,021,644	-		Synpcc7942_1946	0.31	+0.3
2,021,649	-		Synpcc7942_1946	0.33	+0.7
2,021,700	-		Synpcc7942_1946	0.43	+1.0
2,021,714	-		Synpcc7942_1946	0.46	-0.4
2,021,761	+		Synpcc7942_1946	0.56	-0.5
2,021,769	-		Synpcc7942_1946	0.57	+0.9
2,021,786	+		Synpcc7942_1946	0.61	-1.4
2,021,793	-		Synpcc7942_1946	0.62	+0.9
2,021,794	-		Synpcc7942_1946	0.63	+0.7
2,021,794	-		Synpcc7942_1946	0.63	+0.2
2,021,816	+		Synpcc7942_1946	0.67	+0.5
2,021,824	-				-0.1
2,021,835	+		Synpcc7942_1946	0.71	-1.1
2,021,871	-		Synpcc7942_1946	0.79	+0.6
2,021,872	-		Synpcc7942_1946	0.79	+0.9
2,021,890	+		Synpcc7942_1946	0.83	+0.9
2,021,909	+		Synpcc7942_1946	0.87	-0.4
2,021,919	+		Synpcc7942_1946	0.89	-0.3
2,021,920	+		Synpcc7942_1946	0.89	-0.5
2,021,944	-				-0.4
2,021,968	+				+0.5
2,022,013	+				-1.7
2,022,013	+				-0.5
2,022,018	+				-0.1
2,022,021	-				+1.6
2,022,058	-				-0.1
2,022,090	-				-0.9
2,022,101	-				-0.1
2,022,137	-				-0.1
2,022,137	-				-0.5
2,022,137	-				-0.7
2,022,137	-				+0.3
2,022,137	-				-0.5
2,022,137	-				-2.9
2,022,137	-				-0.1
2,022,137	-				-0.6
2,022,137	-				-0.1
2,022,164	-				-1.3
2,022,177	+				-1.1
2,022,177	+				-1.1
2,022,203	-				+0.9
2,022,209	+				-0.3
2,022,251	-		Synpcc7942_1947	0.11	-0.1
2,022,251	-		Synpcc7942_1947	0.11	-0.1
2,022,295	-		Synpcc7942_1947	0.14	-1.1
2,022,298	+		Synpcc7942_1947	0.14	-0.7
2,022,300	-		Synpcc7942_1947	0.15	-1.1
2,022,345	+		Synpcc7942_1947	0.18	-1.7
2,022,367	+		Synpcc7942_1947	0.19	-2.1
2,022,369	-		Synpcc7942_1947	0.19	+0.8
2,022,426	-		Synpcc7942_1947	0.23	-0.7