Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1263

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
1,285,720	-		Synpcc7942_1262	0.43	+0.9
1,285,748	+				-0.1
1,285,757	+		Synpcc7942_1262	0.45	-2.1
1,285,757	+		Synpcc7942_1262	0.45	+0.2
1,285,794	+		Synpcc7942_1262	0.47	+0.5
1,285,794	+				+1.5
1,285,849	+		Synpcc7942_1262	0.51	-0.1
1,285,976	+		Synpcc7942_1262	0.59	+0.9
1,286,114	+		Synpcc7942_1262	0.67	-0.1
1,286,179	-		Synpcc7942_1262	0.71	-0.3
1,286,235	-		Synpcc7942_1262	0.75	-0.1
1,286,242	-		Synpcc7942_1262	0.75	+1.5
1,286,259	+		Synpcc7942_1262	0.76	-0.1
1,286,259	+		Synpcc7942_1262	0.76	-1.4
1,286,259	+		Synpcc7942_1262	0.76	-0.7
1,286,259	+		Synpcc7942_1262	0.76	-0.1
1,286,267	-		Synpcc7942_1262	0.76	+0.4
1,286,306	+		Synpcc7942_1262	0.79	-0.5
1,286,306	+		Synpcc7942_1262	0.79	-0.1
1,286,314	-		Synpcc7942_1262	0.79	+1.5
1,286,314	-		Synpcc7942_1262	0.79	+0.9
1,286,332	+		Synpcc7942_1262	0.80	+1.5
1,286,340	+		Synpcc7942_1262	0.81	+0.9
1,286,385	+		Synpcc7942_1262	0.84	+1.4
1,286,389	+		Synpcc7942_1262	0.84	+0.0
1,286,394	-		Synpcc7942_1262	0.84	+1.2
1,286,409	-		Synpcc7942_1262	0.85	-0.5
1,286,409	-		Synpcc7942_1262	0.85	+0.3
1,286,412	+		Synpcc7942_1262	0.85	-0.1
1,286,438	-		Synpcc7942_1262	0.87	-0.1
1,286,447	-		Synpcc7942_1262	0.88	+0.9
1,286,599	+				+1.5
1,286,652	-				-1.7
1,286,688	+				+1.2
1,286,781	-				+0.5
1,286,802	+				-2.1
1,286,852	+		Synpcc7942_1263	0.13	+2.7
1,286,864	+		Synpcc7942_1263	0.14	-0.8
1,286,884	-		Synpcc7942_1263	0.15	+2.4
1,286,916	+		Synpcc7942_1263	0.18	+1.0
1,286,941	-		Synpcc7942_1263	0.20	+1.9
1,286,943	+		Synpcc7942_1263	0.21	+1.1
1,286,956	-		Synpcc7942_1263	0.22	+1.2
1,286,996	-		Synpcc7942_1263	0.25	+0.5
1,287,001	+		Synpcc7942_1263	0.26	+0.7
1,287,021	+		Synpcc7942_1263	0.28	+0.3
1,287,074	-		Synpcc7942_1263	0.32	+2.9
1,287,081	+		Synpcc7942_1263	0.33	+1.9
1,287,085	+		Synpcc7942_1263	0.33	+2.2
1,287,088	-		Synpcc7942_1263	0.34	+1.0
1,287,101	+		Synpcc7942_1263	0.35	+0.9
1,287,101	+		Synpcc7942_1263	0.35	+0.9
1,287,109	-		Synpcc7942_1263	0.35	+0.3
1,287,139	+		Synpcc7942_1263	0.38	+2.3
1,287,179	+		Synpcc7942_1263	0.42	-0.1
1,287,179	+		Synpcc7942_1263	0.42	+0.9
1,287,193	-		Synpcc7942_1263	0.43	+1.8
1,287,206	+		Synpcc7942_1263	0.44	+0.5
1,287,211	+		Synpcc7942_1263	0.44	-0.1
1,287,248	-		Synpcc7942_1263	0.48	+2.2
1,287,252	+		Synpcc7942_1263	0.48	+1.2
1,287,278	+		Synpcc7942_1263	0.50	+2.4
1,287,280	-		Synpcc7942_1263	0.51	+2.6
1,287,303	-		Synpcc7942_1263	0.53	+0.6
1,287,342	-		Synpcc7942_1263	0.56	+0.7
1,287,356	+		Synpcc7942_1263	0.57	-0.1
1,287,356	+		Synpcc7942_1263	0.57	+0.9
1,287,364	-		Synpcc7942_1263	0.58	+0.9
1,287,367	+		Synpcc7942_1263	0.58	-0.1
1,287,375	-		Synpcc7942_1263	0.59	+3.5
1,287,384	-		Synpcc7942_1263	0.60	+2.6
1,287,385	-		Synpcc7942_1263	0.60	+0.6
1,287,385	-		Synpcc7942_1263	0.60	+0.9
1,287,398	+		Synpcc7942_1263	0.61	+0.4
1,287,406	-		Synpcc7942_1263	0.62	+0.9
1,287,408	-		Synpcc7942_1263	0.62	-1.1
1,287,427	+		Synpcc7942_1263	0.64	+0.9
1,287,478	+		Synpcc7942_1263	0.68	+0.1
1,287,524	-		Synpcc7942_1263	0.72	-0.5
1,287,540	+		Synpcc7942_1263	0.74	+1.5
1,287,540	+		Synpcc7942_1263	0.74	+4.4
1,287,654	+		Synpcc7942_1263	0.84	-1.1
1,287,674	-		Synpcc7942_1263	0.86	+0.6
1,287,689	+		Synpcc7942_1263	0.87	+1.2
1,287,699	+		Synpcc7942_1263	0.88	+0.2
1,287,704	-		Synpcc7942_1263	0.88	-0.1
1,287,707	-		Synpcc7942_1263	0.89	+1.9
1,287,763	+				+2.7
1,287,764	-				+0.7
1,287,770	-				+1.0
1,287,770	-				+2.7
1,287,772	+				+1.5
1,287,780	-				+7.0
1,287,780	-				+0.9
1,287,787	-				+1.6
1,287,803	-				+1.1
1,287,856	-				+0.0
1,287,865	+				+0.2
1,287,865	+				+1.5
1,287,873	-				+0.9
1,287,881	+				+0.9
1,287,891	+				+0.5
1,287,919	-				+0.9
1,287,949	+				-1.7
1,287,957	-				+1.1
1,287,968	+				-0.1
1,287,968	-				-1.1
1,288,004	+				-1.1
1,288,016	+				-0.1
1,288,016	+				+1.9
1,288,021	+				+0.5
1,288,028	+				+0.7
1,288,028	+				-1.1
1,288,029	+				-2.7
1,288,037	-				+0.9
1,288,044	+				-1.7
1,288,079	+				-1.1
1,288,086	+				-0.8
1,288,117	+	nha2	Synpcc7942_1264	0.11	-2.1
1,288,119	+	nha2	Synpcc7942_1264	0.11	-0.1
1,288,126	+	nha2	Synpcc7942_1264	0.11	-1.7
1,288,131	+	nha2	Synpcc7942_1264	0.12	-0.1
1,288,139	-	nha2	Synpcc7942_1264	0.12	+0.9
1,288,164	-	nha2	Synpcc7942_1264	0.14	+0.9
1,288,171	-	nha2	Synpcc7942_1264	0.14	-0.8
1,288,171	-	nha2	Synpcc7942_1264	0.14	-1.4
1,288,239	+	nha2	Synpcc7942_1264	0.18	-0.7
1,288,248	+	nha2	Synpcc7942_1264	0.19	+1.3
1,288,273	+	nha2	Synpcc7942_1264	0.20	+0.3
1,288,276	-	nha2	Synpcc7942_1264	0.20	+0.6
1,288,281	-	nha2	Synpcc7942_1264	0.21	-0.7
1,288,286	-	nha2	Synpcc7942_1264	0.21	+0.9
1,288,304	+	nha2	Synpcc7942_1264	0.22	+1.2
1,288,398	-	nha2	Synpcc7942_1264	0.28	+1.2
1,288,458	-	nha2	Synpcc7942_1264	0.32	-0.8
1,288,468	-	nha2	Synpcc7942_1264	0.32	+0.9
1,288,506	-	nha2	Synpcc7942_1264	0.34	-2.7
1,288,531	-	nha2	Synpcc7942_1264	0.36	-0.1
1,288,541	-	nha2	Synpcc7942_1264	0.37	-0.1
1,288,550	+	nha2	Synpcc7942_1264	0.37	+1.2
1,288,558	-	nha2	Synpcc7942_1264	0.38	-1.7
1,288,559	+	nha2	Synpcc7942_1264	0.38	+0.9
1,288,572	-	nha2	Synpcc7942_1264	0.39	-0.1
1,288,640	-	nha2	Synpcc7942_1264	0.43	-0.6
1,288,661	-	nha2	Synpcc7942_1264	0.44	-0.5
1,288,688	-	nha2	Synpcc7942_1264	0.46	-1.1
1,288,715	+	nha2	Synpcc7942_1264	0.47	+0.9
1,288,725	+	nha2	Synpcc7942_1264	0.48	+0.5
1,288,725	+	nha2	Synpcc7942_1264	0.48	+0.6
1,288,728	-	nha2	Synpcc7942_1264	0.48	-1.1
1,288,754	+	nha2	Synpcc7942_1264	0.50	+0.9
1,288,782	-	nha2	Synpcc7942_1264	0.51	-0.1
1,288,796	+	nha2	Synpcc7942_1264	0.52	-0.1
1,288,804	-	nha2	Synpcc7942_1264	0.53	-1.1
1,288,804	-	nha2	Synpcc7942_1264	0.53	-0.1