Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0071

Experiment: Chloramphenicol 0.0006640625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0006640625 mg/ml
68,952	-				+1.6
68,972	+				-1.0
68,980	-				-0.0
68,985	+				-1.1
68,985	-				+1.3
68,991	+				-0.0
68,996	+				+0.6
68,996	+				+2.7
68,996	+				+1.0
69,001	+				-1.0
69,001	+				+0.4
69,004	-				-0.5
69,004	-				-0.6
69,009	-				-1.6
69,009	-				-0.7
69,014	-				-0.8
69,016	+				-2.8
69,016	-				+0.8
69,080	-				-0.4
69,080	-				-0.3
69,160	+		Synpcc7942_0069	0.27	+0.8
69,160	+		Synpcc7942_0069	0.27	-0.0
69,168	-		Synpcc7942_0069	0.30	+1.0
69,173	-		Synpcc7942_0069	0.32	+2.5
69,179	-		Synpcc7942_0069	0.34	+2.2
69,214	+		Synpcc7942_0069	0.45	-0.4
69,214	+		Synpcc7942_0069	0.45	+1.0
69,217	+				-1.6
69,230	-		Synpcc7942_0069	0.51	-1.0
69,235	-		Synpcc7942_0069	0.53	-0.0
69,253	+		Synpcc7942_0069	0.59	+1.0
69,261	-		Synpcc7942_0069	0.61	+0.6
69,287	+		Synpcc7942_0069	0.70	-1.8
69,287	+		Synpcc7942_0069	0.70	+0.8
69,287	+		Synpcc7942_0069	0.70	+0.7
69,289	+		Synpcc7942_0069	0.71	+0.4
69,292	+		Synpcc7942_0069	0.72	-0.0
69,297	+		Synpcc7942_0069	0.73	+0.2
69,297	+		Synpcc7942_0069	0.73	-1.6
69,297	+		Synpcc7942_0069	0.73	-1.5
69,297	+		Synpcc7942_0069	0.73	+1.0
69,300	-		Synpcc7942_0069	0.74	-2.8
69,305	-		Synpcc7942_0069	0.76	+0.7
69,307	-		Synpcc7942_0069	0.77	+0.4
69,347	-				+2.3
69,370	-				-0.2
69,377	-				+2.6
69,422	+				-0.0
69,422	+				+2.0
69,430	-				+0.6
69,502	-		Synpcc7942_0070	0.22	-0.5
69,502	-		Synpcc7942_0070	0.22	-1.0
69,515	+		Synpcc7942_0070	0.24	+1.3
69,515	+		Synpcc7942_0070	0.24	+2.8
69,551	+		Synpcc7942_0070	0.31	+2.3
69,552	+		Synpcc7942_0070	0.31	-0.3
69,560	-		Synpcc7942_0070	0.32	-0.6
69,562	+		Synpcc7942_0070	0.33	+0.5
69,562	+		Synpcc7942_0070	0.33	-0.0
69,562	+		Synpcc7942_0070	0.33	+1.0
69,562	+		Synpcc7942_0070	0.33	+1.6
69,562	+		Synpcc7942_0070	0.33	-2.0
69,562	+		Synpcc7942_0070	0.33	+0.4
69,570	-		Synpcc7942_0070	0.34	+1.4
69,570	-		Synpcc7942_0070	0.34	-0.0
69,570	-		Synpcc7942_0070	0.34	-0.0
69,570	-		Synpcc7942_0070	0.34	-1.0
69,570	-		Synpcc7942_0070	0.34	-0.0
69,570	-		Synpcc7942_0070	0.34	+2.1
69,574	+		Synpcc7942_0070	0.35	+0.8
69,577	+		Synpcc7942_0070	0.35	+2.8
69,577	-		Synpcc7942_0070	0.35	-1.0
69,582	+		Synpcc7942_0070	0.36	-0.0
69,582	-		Synpcc7942_0070	0.36	+1.6
69,585	-				+1.6
69,645	+		Synpcc7942_0070	0.48	+0.6
69,710	-		Synpcc7942_0070	0.59	-0.4
69,739	+		Synpcc7942_0070	0.64	-2.0
69,779	-		Synpcc7942_0070	0.71	-1.3
69,845	-		Synpcc7942_0070	0.83	+1.0
69,909	+				-0.6
69,909	+				+1.8
69,909	+				+0.4
69,909	+				-0.0
69,917	-				+1.0
69,917	-				-1.0
69,917	-				+1.8
69,929	+				+1.0
69,934	+				-1.0
69,946	-				-0.0
71,112	+				+0.8
71,134	+				+1.0
71,146	-				+0.6
71,159	-				-0.0
71,160	-				+0.6
71,171	+				+1.3
71,171	+				-0.0
71,171	+				+0.5
71,171	+				+0.6
71,171	+				-2.4
71,171	+				+3.0
71,179	-				-1.6
71,179	-				-0.0
71,179	-				+1.4
71,242	-				+0.4
71,262	+				+1.0
71,288	+				+1.0
71,294	-				+0.6
71,296	-				-0.0
71,378	+		Synpcc7942_0072	0.11	+2.0
71,386	-		Synpcc7942_0072	0.12	+1.0
71,396	-		Synpcc7942_0072	0.14	-1.0
71,396	-		Synpcc7942_0072	0.14	-0.4
71,431	+		Synpcc7942_0072	0.19	-1.6
71,431	+		Synpcc7942_0072	0.19	+1.0
71,480	-		Synpcc7942_0072	0.26	-1.0
71,485	-		Synpcc7942_0072	0.27	-0.6
71,499	-		Synpcc7942_0072	0.29	-1.0
71,503	+		Synpcc7942_0072	0.30	-0.5
71,511	-		Synpcc7942_0072	0.31	-0.0
71,571	-		Synpcc7942_0072	0.40	-1.6
71,576	-		Synpcc7942_0072	0.41	+1.6
71,604	-		Synpcc7942_0072	0.45	-1.6
71,610	+		Synpcc7942_0072	0.46	-1.0
71,629	-		Synpcc7942_0072	0.49	-2.4
71,634	-		Synpcc7942_0072	0.50	-0.6
71,634	-		Synpcc7942_0072	0.50	+1.6
71,653	-		Synpcc7942_0072	0.53	-2.0
71,661	-				+1.6
71,694	+		Synpcc7942_0072	0.59	-0.6
71,694	+		Synpcc7942_0072	0.59	-0.3
71,701	+		Synpcc7942_0072	0.60	-1.0
71,709	-		Synpcc7942_0072	0.61	-1.0
71,742	-		Synpcc7942_0072	0.67	-0.6
71,772	+		Synpcc7942_0072	0.71	-1.0
71,817	-		Synpcc7942_0072	0.78	+1.0
71,824	-		Synpcc7942_0072	0.79	-0.0
71,827	-		Synpcc7942_0072	0.80	-0.8
71,834	+		Synpcc7942_0072	0.81	-0.0
71,881	-		Synpcc7942_0072	0.88	-1.0
71,892	-		Synpcc7942_0072	0.89	-1.0
71,903	+				-0.0
71,911	-				-2.0
71,918	-				+1.0
71,918	-				-0.8
71,942	-				-1.0
71,962	-				-0.0
71,966	-				-0.0
71,972	-				-1.0
71,974	-				-2.4
71,998	+				+2.3