Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21530 and SM_b21531 are separated by 60 nucleotides SM_b21531 and SM_b21532 overlap by 1 nucleotides
SM_b21530: SM_b21530 - sulfoacetaldehyde acetyltransferase, at 1,055,664 to 1,057,439
_b21530
SM_b21531: SM_b21531 - hypothetical protein, at 1,057,500 to 1,058,537
_b21531
SM_b21532: SM_b21532 - phosphate acetyltransferase, at 1,058,537 to 1,059,529
_b21532
Position (kb)
1057
1058
1059 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1056.517 kb on + strand, within SM_b21530 at 1056.517 kb on + strand, within SM_b21530 at 1056.517 kb on + strand, within SM_b21530 at 1056.517 kb on + strand, within SM_b21530 at 1056.517 kb on + strand at 1056.518 kb on - strand, within SM_b21530 at 1056.518 kb on - strand, within SM_b21530 at 1056.518 kb on - strand, within SM_b21530 at 1056.522 kb on + strand, within SM_b21530 at 1056.523 kb on - strand, within SM_b21530 at 1056.907 kb on - strand, within SM_b21530 at 1056.933 kb on + strand, within SM_b21530 at 1057.123 kb on - strand, within SM_b21530 at 1057.148 kb on + strand, within SM_b21530 at 1057.149 kb on - strand, within SM_b21530 at 1057.149 kb on - strand, within SM_b21530 at 1057.206 kb on + strand, within SM_b21530 at 1057.433 kb on + strand at 1057.433 kb on + strand at 1057.433 kb on + strand at 1057.434 kb on - strand at 1057.437 kb on + strand at 1057.437 kb on + strand at 1057.438 kb on - strand at 1057.560 kb on + strand at 1057.560 kb on + strand at 1057.560 kb on + strand at 1057.560 kb on + strand at 1057.561 kb on - strand at 1057.561 kb on - strand at 1057.561 kb on - strand at 1057.771 kb on + strand, within SM_b21531 at 1057.771 kb on + strand, within SM_b21531 at 1057.771 kb on + strand, within SM_b21531 at 1057.772 kb on - strand, within SM_b21531 at 1058.055 kb on + strand, within SM_b21531 at 1058.056 kb on - strand, within SM_b21531 at 1058.517 kb on + strand at 1058.518 kb on - strand at 1058.665 kb on + strand, within SM_b21532 at 1058.765 kb on - strand, within SM_b21532 at 1058.787 kb on - strand, within SM_b21532 at 1058.787 kb on - strand, within SM_b21532 at 1059.119 kb on + strand, within SM_b21532 at 1059.119 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.376 kb on + strand, within SM_b21532 at 1059.496 kb on + strand at 1059.496 kb on + strand at 1059.497 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 1,056,517 + SM_b21530 0.48 -0.4 1,056,517 + SM_b21530 0.48 +0.2 1,056,517 + SM_b21530 0.48 +0.9 1,056,517 + SM_b21530 0.48 -0.2 1,056,517 + +1.9 1,056,518 - SM_b21530 0.48 +0.5 1,056,518 - SM_b21530 0.48 -2.6 1,056,518 - SM_b21530 0.48 -1.5 1,056,522 + SM_b21530 0.48 +0.1 1,056,523 - SM_b21530 0.48 -0.0 1,056,907 - SM_b21530 0.70 -1.1 1,056,933 + SM_b21530 0.71 +0.1 1,057,123 - SM_b21530 0.82 +0.7 1,057,148 + SM_b21530 0.84 +0.2 1,057,149 - SM_b21530 0.84 +0.1 1,057,149 - SM_b21530 0.84 -0.6 1,057,206 + SM_b21530 0.87 +0.4 1,057,433 + +1.5 1,057,433 + -2.2 1,057,433 + -1.2 1,057,434 - +0.6 1,057,437 + -3.1 1,057,437 + -1.0 1,057,438 - -0.8 1,057,560 + +0.7 1,057,560 + +0.1 1,057,560 + +1.4 1,057,560 + +1.2 1,057,561 - -0.2 1,057,561 - -0.0 1,057,561 - -1.9 1,057,771 + SM_b21531 0.26 -0.4 1,057,771 + SM_b21531 0.26 -0.4 1,057,771 + SM_b21531 0.26 +0.5 1,057,772 - SM_b21531 0.26 +0.0 1,058,055 + SM_b21531 0.53 -2.6 1,058,056 - SM_b21531 0.54 -0.2 1,058,517 + +4.8 1,058,518 - -0.2 1,058,665 + SM_b21532 0.13 -0.7 1,058,765 - SM_b21532 0.23 +2.1 1,058,787 - SM_b21532 0.25 +2.9 1,058,787 - SM_b21532 0.25 -0.1 1,059,119 + SM_b21532 0.59 +0.1 1,059,119 + SM_b21532 0.59 +1.9 1,059,250 + SM_b21532 0.72 -0.6 1,059,250 + SM_b21532 0.72 +1.2 1,059,250 + SM_b21532 0.72 -0.1 1,059,250 + SM_b21532 0.72 +1.3 1,059,376 + SM_b21532 0.84 +0.7 1,059,496 + -0.5 1,059,496 + -1.1 1,059,497 - +0.2
Or see this region's nucleotide sequence