Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20613 and SM_b20614 are separated by 124 nucleotides SM_b20614 and SM_b20615 are separated by 376 nucleotides
SM_b20613: SM_b20613 - C4-dicarboxylate transport transcriptional regulator, at 1,630,003 to 1,631,385
_b20613
SM_b20614: SM_b20614 - hypothetical protein, at 1,631,510 to 1,633,567
_b20614
SM_b20615: SM_b20615 - thiamine biosynthesis protein ThiC, at 1,633,944 to 1,635,779
_b20615
Position (kb)
1631
1632
1633
1634 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1630.909 kb on + strand, within SM_b20613 at 1630.909 kb on + strand, within SM_b20613 at 1630.910 kb on - strand, within SM_b20613 at 1630.912 kb on + strand, within SM_b20613 at 1631.057 kb on - strand, within SM_b20613 at 1631.203 kb on + strand, within SM_b20613 at 1631.204 kb on - strand, within SM_b20613 at 1631.335 kb on + strand at 1631.336 kb on - strand at 1631.336 kb on - strand at 1631.427 kb on - strand at 1631.511 kb on + strand at 1631.511 kb on + strand at 1631.779 kb on - strand, within SM_b20614 at 1631.779 kb on - strand, within SM_b20614 at 1631.960 kb on - strand, within SM_b20614 at 1632.073 kb on + strand, within SM_b20614 at 1632.073 kb on + strand, within SM_b20614 at 1632.073 kb on + strand, within SM_b20614 at 1632.073 kb on + strand, within SM_b20614 at 1632.073 kb on + strand, within SM_b20614 at 1632.073 kb on + strand, within SM_b20614 at 1632.074 kb on - strand, within SM_b20614 at 1632.074 kb on - strand, within SM_b20614 at 1632.112 kb on + strand, within SM_b20614 at 1632.408 kb on + strand, within SM_b20614 at 1632.409 kb on - strand, within SM_b20614 at 1632.545 kb on - strand, within SM_b20614 at 1632.545 kb on - strand, within SM_b20614 at 1632.609 kb on + strand, within SM_b20614 at 1632.609 kb on + strand, within SM_b20614 at 1632.610 kb on - strand, within SM_b20614 at 1632.733 kb on - strand, within SM_b20614 at 1632.789 kb on + strand, within SM_b20614 at 1632.789 kb on + strand, within SM_b20614 at 1632.790 kb on - strand, within SM_b20614 at 1632.790 kb on - strand, within SM_b20614 at 1632.790 kb on - strand, within SM_b20614 at 1632.832 kb on + strand, within SM_b20614 at 1632.833 kb on - strand, within SM_b20614 at 1632.834 kb on + strand, within SM_b20614 at 1632.834 kb on + strand, within SM_b20614 at 1632.835 kb on - strand, within SM_b20614 at 1632.850 kb on - strand, within SM_b20614 at 1633.168 kb on - strand, within SM_b20614 at 1633.235 kb on + strand, within SM_b20614 at 1633.235 kb on + strand, within SM_b20614 at 1633.236 kb on - strand, within SM_b20614 at 1633.264 kb on + strand, within SM_b20614 at 1633.417 kb on + strand at 1633.418 kb on + strand at 1633.419 kb on - strand at 1633.432 kb on - strand at 1633.432 kb on - strand at 1633.460 kb on + strand at 1633.583 kb on - strand at 1633.727 kb on + strand at 1633.727 kb on + strand at 1633.728 kb on - strand at 1633.770 kb on + strand at 1633.771 kb on - strand at 1633.822 kb on + strand at 1633.951 kb on + strand at 1634.017 kb on - strand at 1634.017 kb on - strand at 1634.017 kb on - strand at 1634.215 kb on - strand, within SM_b20615 at 1634.341 kb on - strand, within SM_b20615
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 1,630,909 + SM_b20613 0.66 -0.0 1,630,909 + SM_b20613 0.66 +0.8 1,630,910 - SM_b20613 0.66 +0.1 1,630,912 + SM_b20613 0.66 +0.5 1,631,057 - SM_b20613 0.76 +1.5 1,631,203 + SM_b20613 0.87 +1.3 1,631,204 - SM_b20613 0.87 -2.0 1,631,335 + -2.5 1,631,336 - -0.1 1,631,336 - +0.7 1,631,427 - -0.1 1,631,511 + +0.4 1,631,511 + +1.0 1,631,779 - SM_b20614 0.13 -0.6 1,631,779 - SM_b20614 0.13 +1.5 1,631,960 - SM_b20614 0.22 +0.8 1,632,073 + SM_b20614 0.27 +2.4 1,632,073 + SM_b20614 0.27 +1.3 1,632,073 + SM_b20614 0.27 -0.1 1,632,073 + SM_b20614 0.27 -1.1 1,632,073 + SM_b20614 0.27 +0.3 1,632,073 + SM_b20614 0.27 -0.4 1,632,074 - SM_b20614 0.27 +0.9 1,632,074 - SM_b20614 0.27 +0.6 1,632,112 + SM_b20614 0.29 -0.1 1,632,408 + SM_b20614 0.44 +0.5 1,632,409 - SM_b20614 0.44 -1.2 1,632,545 - SM_b20614 0.50 -0.3 1,632,545 - SM_b20614 0.50 -0.8 1,632,609 + SM_b20614 0.53 -1.4 1,632,609 + SM_b20614 0.53 +0.4 1,632,610 - SM_b20614 0.53 -1.1 1,632,733 - SM_b20614 0.59 +1.0 1,632,789 + SM_b20614 0.62 +0.4 1,632,789 + SM_b20614 0.62 -1.6 1,632,790 - SM_b20614 0.62 +2.0 1,632,790 - SM_b20614 0.62 +0.1 1,632,790 - SM_b20614 0.62 +0.3 1,632,832 + SM_b20614 0.64 +1.8 1,632,833 - SM_b20614 0.64 +2.0 1,632,834 + SM_b20614 0.64 -1.4 1,632,834 + SM_b20614 0.64 +1.9 1,632,835 - SM_b20614 0.64 -1.8 1,632,850 - SM_b20614 0.65 +1.1 1,633,168 - SM_b20614 0.81 +0.1 1,633,235 + SM_b20614 0.84 -1.0 1,633,235 + SM_b20614 0.84 +0.4 1,633,236 - SM_b20614 0.84 +0.5 1,633,264 + SM_b20614 0.85 -0.0 1,633,417 + +1.1 1,633,418 + +2.7 1,633,419 - -2.2 1,633,432 - -0.6 1,633,432 - +0.3 1,633,460 + -2.1 1,633,583 - +0.8 1,633,727 + +0.5 1,633,727 + -2.9 1,633,728 - +1.0 1,633,770 + -1.3 1,633,771 - -2.5 1,633,822 + +0.1 1,633,951 + +0.3 1,634,017 - +0.6 1,634,017 - -3.2 1,634,017 - +0.4 1,634,215 - SM_b20615 0.15 -0.6 1,634,341 - SM_b20615 0.22 +0.4
Or see this region's nucleotide sequence