Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20349 and SM_b20350 are separated by 165 nucleotides SM_b20350 and SM_b20351 overlap by 4 nucleotides
SM_b20349: SM_b20349 - sugar ABC transporter, at 356,464 to 357,405
_b20349
SM_b20350: SM_b20350 - hypothetical protein, at 357,571 to 358,215
_b20350
SM_b20351: SM_b20351 - sugar ABC transporter ATP-binding protein, at 358,212 to 359,762
_b20351
Position (kb) 357
358
359 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 356.861 kb on - strand, within SM_b20349 at 356.920 kb on + strand, within SM_b20349 at 356.920 kb on + strand, within SM_b20349 at 356.920 kb on + strand, within SM_b20349 at 356.921 kb on - strand, within SM_b20349 at 356.921 kb on - strand, within SM_b20349 at 356.921 kb on - strand, within SM_b20349 at 357.055 kb on + strand, within SM_b20349 at 357.073 kb on - strand, within SM_b20349 at 357.106 kb on - strand, within SM_b20349 at 357.259 kb on + strand, within SM_b20349 at 357.260 kb on - strand, within SM_b20349 at 357.298 kb on + strand, within SM_b20349 at 357.299 kb on - strand, within SM_b20349 at 357.739 kb on + strand, within SM_b20350 at 357.817 kb on + strand, within SM_b20350 at 357.885 kb on + strand, within SM_b20350 at 357.886 kb on - strand, within SM_b20350 at 357.914 kb on - strand, within SM_b20350 at 358.275 kb on + strand at 358.284 kb on - strand at 358.285 kb on + strand at 358.286 kb on - strand at 358.725 kb on - strand, within SM_b20351 at 358.821 kb on + strand, within SM_b20351 at 358.822 kb on - strand, within SM_b20351 at 358.863 kb on + strand, within SM_b20351 at 358.863 kb on + strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.922 kb on + strand, within SM_b20351 at 359.078 kb on - strand, within SM_b20351 at 359.078 kb on - strand, within SM_b20351 at 359.103 kb on + strand, within SM_b20351 at 359.103 kb on + strand, within SM_b20351 at 359.104 kb on - strand, within SM_b20351 at 359.104 kb on - strand, within SM_b20351
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 356,861 - SM_b20349 0.42 +0.6 356,920 + SM_b20349 0.48 -1.3 356,920 + SM_b20349 0.48 +1.8 356,920 + SM_b20349 0.48 -0.4 356,921 - SM_b20349 0.49 -0.1 356,921 - SM_b20349 0.49 -1.3 356,921 - SM_b20349 0.49 +1.3 357,055 + SM_b20349 0.63 -2.4 357,073 - SM_b20349 0.65 +0.3 357,106 - SM_b20349 0.68 -1.5 357,259 + SM_b20349 0.84 -0.3 357,260 - SM_b20349 0.85 +0.4 357,298 + SM_b20349 0.89 +0.4 357,299 - SM_b20349 0.89 -0.5 357,739 + SM_b20350 0.26 +0.2 357,817 + SM_b20350 0.38 -1.8 357,885 + SM_b20350 0.49 -2.3 357,886 - SM_b20350 0.49 -3.1 357,914 - SM_b20350 0.53 -1.2 358,275 + +2.6 358,284 - -2.3 358,285 + +0.8 358,286 - +0.1 358,725 - SM_b20351 0.33 -1.3 358,821 + SM_b20351 0.39 -0.9 358,822 - SM_b20351 0.39 -0.6 358,863 + SM_b20351 0.42 -0.6 358,863 + SM_b20351 0.42 -0.7 358,864 - SM_b20351 0.42 +0.3 358,864 - SM_b20351 0.42 -0.5 358,864 - SM_b20351 0.42 -0.3 358,922 + SM_b20351 0.46 -0.5 359,078 - SM_b20351 0.56 -0.3 359,078 - SM_b20351 0.56 -0.3 359,103 + SM_b20351 0.57 +0.6 359,103 + SM_b20351 0.57 +2.1 359,104 - SM_b20351 0.58 +0.0 359,104 - SM_b20351 0.58 +0.4
Or see this region's nucleotide sequence