Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20286 and SM_b20287 are separated by 18 nucleotides SM_b20287 and SM_b20288 overlap by 4 nucleotides
SM_b20286: SM_b20286 - hypothetical protein, at 290,921 to 292,000
_b20286
SM_b20287: SM_b20287 - hypothetical protein, at 292,019 to 292,726
_b20287
SM_b20288: SM_b20288 - hypothetical protein, at 292,723 to 294,123
_b20288
Position (kb) 292
293 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 291.252 kb on - strand, within SM_b20286 at 291.684 kb on + strand, within SM_b20286 at 291.782 kb on + strand, within SM_b20286 at 291.782 kb on + strand, within SM_b20286 at 291.783 kb on - strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.789 kb on - strand, within SM_b20286 at 291.789 kb on - strand, within SM_b20286 at 291.789 kb on - strand, within SM_b20286 at 292.061 kb on - strand at 292.149 kb on + strand, within SM_b20287 at 292.164 kb on - strand, within SM_b20287 at 292.257 kb on - strand, within SM_b20287 at 292.278 kb on + strand, within SM_b20287 at 292.279 kb on - strand, within SM_b20287 at 292.639 kb on + strand, within SM_b20287 at 292.711 kb on + strand at 293.502 kb on + strand, within SM_b20288 at 293.502 kb on + strand, within SM_b20288 at 293.502 kb on + strand, within SM_b20288 at 293.502 kb on + strand, within SM_b20288 at 293.503 kb on - strand, within SM_b20288 at 293.503 kb on - strand, within SM_b20288 at 293.656 kb on + strand, within SM_b20288 at 293.657 kb on - strand, within SM_b20288 at 293.706 kb on + strand, within SM_b20288 at 293.706 kb on + strand, within SM_b20288
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 291,252 - SM_b20286 0.31 +0.2 291,684 + SM_b20286 0.71 +0.6 291,782 + SM_b20286 0.80 +1.2 291,782 + SM_b20286 0.80 -0.8 291,783 - SM_b20286 0.80 -0.7 291,788 + SM_b20286 0.80 +1.2 291,788 + SM_b20286 0.80 -1.0 291,788 + SM_b20286 0.80 -2.7 291,788 + SM_b20286 0.80 +0.3 291,789 - SM_b20286 0.80 -2.2 291,789 - SM_b20286 0.80 -0.3 291,789 - SM_b20286 0.80 -2.4 292,061 - +0.6 292,149 + SM_b20287 0.18 +0.0 292,164 - SM_b20287 0.20 -0.5 292,257 - SM_b20287 0.34 -4.0 292,278 + SM_b20287 0.37 -0.6 292,279 - SM_b20287 0.37 -0.9 292,639 + SM_b20287 0.88 -1.2 292,711 + -1.1 293,502 + SM_b20288 0.56 +0.4 293,502 + SM_b20288 0.56 +2.2 293,502 + SM_b20288 0.56 -1.1 293,502 + SM_b20288 0.56 -1.1 293,503 - SM_b20288 0.56 -1.0 293,503 - SM_b20288 0.56 +0.2 293,656 + SM_b20288 0.67 -3.3 293,657 - SM_b20288 0.67 -1.5 293,706 + SM_b20288 0.70 -2.5 293,706 + SM_b20288 0.70 -0.5
Or see this region's nucleotide sequence