Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03506

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
3,663,101	-		CCNA_03504	0.83	-0.8
3,663,150	+		CCNA_03504	0.86	+0.3
3,663,156	+		CCNA_03504	0.86	+1.8
3,663,231	+				+1.5
3,663,231	+				-0.4
3,663,256	+				-0.8
3,663,278	-				-1.2
3,663,285	-				+0.5
3,663,295	-				+0.3
3,663,300	-				+1.1
3,663,300	-				+0.2
3,663,300	-				+1.7
3,663,306	-				+1.6
3,663,319	+				+1.4
3,663,324	+				-0.1
3,663,327	-				+0.7
3,663,346	+				+0.4
3,663,394	-				+1.1
3,663,397	-				-0.5
3,663,423	-				+0.1
3,663,423	-				+0.9
3,663,423	-				+0.6
3,663,425	+				+0.1
3,663,433	-				-0.9
3,663,449	+				-1.0
3,663,513	+				-0.8
3,663,513	+				-0.2
3,663,513	+				+0.0
3,663,513	+				-0.9
3,663,513	+				+0.9
3,663,521	-				+1.3
3,663,521	-				+0.6
3,663,563	-		CCNA_03505	0.17	+1.5
3,663,571	+		CCNA_03505	0.19	-0.7
3,663,608	-		CCNA_03505	0.27	+0.3
3,663,631	+		CCNA_03505	0.31	-1.6
3,663,676	-		CCNA_03505	0.41	+1.0
3,663,697	-		CCNA_03505	0.45	+0.2
3,663,702	+		CCNA_03505	0.46	-1.7
3,663,710	-		CCNA_03505	0.48	+0.8
3,663,759	+		CCNA_03505	0.58	+1.7
3,663,759	+		CCNA_03505	0.58	-0.3
3,663,759	-		CCNA_03505	0.58	+0.1
3,663,767	-		CCNA_03505	0.60	+1.6
3,663,803	+		CCNA_03505	0.67	-0.7
3,663,808	+		CCNA_03505	0.68	-0.9
3,663,811	-		CCNA_03505	0.69	+1.3
3,663,818	+		CCNA_03505	0.70	+1.5
3,663,826	-		CCNA_03505	0.72	-0.1
3,663,858	-		CCNA_03505	0.78	-1.2
3,663,866	-		CCNA_03505	0.80	+0.4
3,663,877	+		CCNA_03505	0.82	-0.3
3,663,882	+		CCNA_03505	0.83	-0.5
3,663,895	-		CCNA_03505	0.86	+0.5
3,663,895	-		CCNA_03505	0.86	-0.1
3,663,899	+		CCNA_03505	0.87	-1.4
3,663,900	-		CCNA_03505	0.87	-0.4
3,663,907	-		CCNA_03505	0.89	+0.0
3,663,966	-				+0.5
3,663,971	-				-0.8
3,663,973	-				+0.8
3,663,973	-				+0.7
3,663,996	-				-0.8
3,664,000	+				-0.9
3,664,003	+				-0.5
3,664,008	-				-0.1
3,664,011	-				-1.1
3,664,018	-				+0.7
3,664,054	-				-0.9
3,664,080	+				+1.4
3,664,081	+				-1.6
3,664,087	+				-1.9
3,664,087	+				+0.3
3,664,087	+				-1.6
3,664,095	-				-0.0
3,664,148	-				-0.7
3,664,186	+		CCNA_03506	0.16	+0.5
3,664,191	+		CCNA_03506	0.17	+0.2
3,664,194	-		CCNA_03506	0.18	-1.1
3,664,199	-		CCNA_03506	0.19	-1.1
3,664,257	+		CCNA_03506	0.28	+1.3
3,664,262	+		CCNA_03506	0.29	+1.1
3,664,272	+		CCNA_03506	0.31	+1.1
3,664,272	+		CCNA_03506	0.31	-1.1
3,664,272	+		CCNA_03506	0.31	+0.3
3,664,272	+		CCNA_03506	0.31	+0.1
3,664,293	-		CCNA_03506	0.35	+3.5
3,664,307	+		CCNA_03506	0.37	+1.6
3,664,326	-		CCNA_03506	0.40	-0.0
3,664,334	-		CCNA_03506	0.41	-1.7
3,664,377	+		CCNA_03506	0.49	+0.7
3,664,385	+		CCNA_03506	0.50	-0.2
3,664,385	-		CCNA_03506	0.50	+0.3
3,664,443	+		CCNA_03506	0.60	-0.4
3,664,450	+		CCNA_03506	0.61	-0.1
3,664,450	+		CCNA_03506	0.61	+0.6
3,664,458	-		CCNA_03506	0.63	-0.6
3,664,463	-		CCNA_03506	0.63	+1.7
3,664,463	-		CCNA_03506	0.63	+0.7
3,664,492	+		CCNA_03506	0.68	+2.0
3,664,492	+		CCNA_03506	0.68	-0.0
3,664,505	-		CCNA_03506	0.71	+0.2
3,664,532	-		CCNA_03506	0.75	+1.2
3,664,537	-		CCNA_03506	0.76	+0.7
3,664,556	-		CCNA_03506	0.79	+0.6
3,664,623	+				-1.9
3,664,689	+				-1.1
3,664,742	+				-0.4
3,664,742	+				+0.8
3,664,744	+				-2.9
3,664,744	+				-0.6
3,664,744	+				+1.2
3,664,744	+				-0.7
3,664,750	-				+0.1
3,664,752	-				+1.2
3,664,752	-				+0.3
3,664,752	-				+0.2
3,664,758	-				+1.3
3,664,780	+				-0.5
3,664,788	-				+1.5
3,664,801	+				+0.7
3,664,803	-				+0.3
3,664,836	+				-1.6
3,664,836	+				-1.5
3,664,836	+				+1.4
3,664,842	+				-0.1
3,664,843	-				+0.7
3,664,844	-				+0.8
3,664,844	-				+0.2
3,664,850	-				+1.2
3,664,850	-				-1.7
3,664,856	-				-0.1
3,664,947	-		CCNA_03507	0.12	+1.6
3,664,947	-		CCNA_03507	0.12	-0.5
3,664,960	+		CCNA_03507	0.13	-0.0
3,664,968	-		CCNA_03507	0.13	-0.3
3,665,019	-		CCNA_03507	0.16	-0.2
3,665,035	+		CCNA_03507	0.17	+1.4
3,665,073	-		CCNA_03507	0.20	+0.1
3,665,088	+		CCNA_03507	0.21	+0.4
3,665,088	+		CCNA_03507	0.21	-1.4
3,665,095	-				+3.1
3,665,110	+		CCNA_03507	0.22	+0.7
3,665,140	-		CCNA_03507	0.24	-0.6
3,665,216	-		CCNA_03507	0.28	+0.2
3,665,286	-		CCNA_03507	0.32	-0.3
3,665,327	-		CCNA_03507	0.35	-0.0
3,665,343	-		CCNA_03507	0.36	+0.0
3,665,356	+		CCNA_03507	0.37	-1.3
3,665,369	-		CCNA_03507	0.37	+0.8
3,665,423	+		CCNA_03507	0.41	-1.9
3,665,431	-		CCNA_03507	0.41	+0.6
3,665,436	+		CCNA_03507	0.41	-1.3
3,665,444	-		CCNA_03507	0.42	+0.4
3,665,494	-		CCNA_03507	0.45	-0.3
3,665,504	-		CCNA_03507	0.45	-0.5
3,665,526	+		CCNA_03507	0.47	-0.6
3,665,539	-		CCNA_03507	0.48	+1.1
3,665,633	+		CCNA_03507	0.53	-0.3
3,665,643	+		CCNA_03507	0.54	-0.5
3,665,651	-		CCNA_03507	0.54	+0.9