Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03125

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
3,270,018	+		CCNA_03124	0.11	+1.0
3,270,018	+		CCNA_03124	0.11	-2.1
3,270,018	+		CCNA_03124	0.11	+1.2
3,270,018	+		CCNA_03124	0.11	-0.1
3,270,038	+		CCNA_03124	0.13	+1.3
3,270,071	-		CCNA_03124	0.16	+0.3
3,270,103	+		CCNA_03124	0.19	+0.4
3,270,110	+		CCNA_03124	0.19	+0.5
3,270,137	+		CCNA_03124	0.22	+1.1
3,270,138	+		CCNA_03124	0.22	-0.2
3,270,149	+		CCNA_03124	0.23	-1.9
3,270,163	-		CCNA_03124	0.24	-0.8
3,270,170	+		CCNA_03124	0.25	+0.5
3,270,179	-		CCNA_03124	0.26	-2.0
3,270,211	+		CCNA_03124	0.28	-3.1
3,270,211	+		CCNA_03124	0.28	+0.8
3,270,219	-		CCNA_03124	0.29	+0.1
3,270,235	-		CCNA_03124	0.31	+0.5
3,270,259	-		CCNA_03124	0.33	+0.1
3,270,259	-		CCNA_03124	0.33	+3.8
3,270,261	+		CCNA_03124	0.33	+0.4
3,270,261	+		CCNA_03124	0.33	-1.6
3,270,261	+		CCNA_03124	0.33	-1.9
3,270,261	+		CCNA_03124	0.33	-0.4
3,270,269	-		CCNA_03124	0.34	-0.4
3,270,269	-		CCNA_03124	0.34	-1.8
3,270,269	-		CCNA_03124	0.34	+1.0
3,270,269	-		CCNA_03124	0.34	+0.3
3,270,271	-		CCNA_03124	0.34	-1.1
3,270,295	+		CCNA_03124	0.36	+0.3
3,270,303	-		CCNA_03124	0.37	-1.2
3,270,363	+		CCNA_03124	0.42	-0.4
3,270,363	+		CCNA_03124	0.42	+0.7
3,270,363	-		CCNA_03124	0.42	-1.9
3,270,377	-		CCNA_03124	0.44	+0.9
3,270,392	-		CCNA_03124	0.45	-1.2
3,270,402	+		CCNA_03124	0.46	-2.0
3,270,423	+		CCNA_03124	0.48	-1.0
3,270,433	+		CCNA_03124	0.49	-2.2
3,270,433	+		CCNA_03124	0.49	-0.6
3,270,433	+		CCNA_03124	0.49	-0.5
3,270,433	+		CCNA_03124	0.49	-1.5
3,270,433	+		CCNA_03124	0.49	-1.7
3,270,433	+		CCNA_03124	0.49	-1.4
3,270,441	-		CCNA_03124	0.49	+0.5
3,270,441	-		CCNA_03124	0.49	-0.1
3,270,455	+		CCNA_03124	0.51	-1.0
3,270,457	+		CCNA_03124	0.51	-2.3
3,270,463	-		CCNA_03124	0.51	+0.8
3,270,486	+		CCNA_03124	0.53	-1.0
3,270,486	+		CCNA_03124	0.53	-0.2
3,270,533	-		CCNA_03124	0.58	-2.2
3,270,559	+		CCNA_03124	0.60	-0.2
3,270,560	+		CCNA_03124	0.60	-2.5
3,270,569	+		CCNA_03124	0.61	+1.5
3,270,569	+		CCNA_03124	0.61	-0.7
3,270,569	+		CCNA_03124	0.61	-1.9
3,270,577	-		CCNA_03124	0.62	-0.1
3,270,596	+		CCNA_03124	0.63	+1.5
3,270,665	-		CCNA_03124	0.70	-0.8
3,270,665	-				+2.8
3,270,665	-		CCNA_03124	0.70	-0.2
3,270,668	-		CCNA_03124	0.70	+0.3
3,270,707	+		CCNA_03124	0.73	+0.1
3,270,777	-		CCNA_03124	0.80	-0.3
3,270,777	-		CCNA_03124	0.80	+1.3
3,270,820	+		CCNA_03124	0.84	-2.0
3,270,828	-		CCNA_03124	0.84	-0.1
3,270,916	+				-0.5
3,270,916	+				+1.3
3,270,951	-				+2.2
3,270,961	-				+0.5
3,271,002	+				+1.5
3,271,071	+				-0.7
3,271,081	+				+1.8
3,271,081	+				-0.2
3,271,089	-				-0.6
3,271,113	-				-0.9
3,271,133	+				-0.0
3,271,137	-				-1.6
3,271,143	+				-0.7
3,271,148	+		CCNA_03125	0.10	-2.6
3,271,155	+		CCNA_03125	0.11	+0.5
3,271,156	-		CCNA_03125	0.11	-0.9
3,271,163	-		CCNA_03125	0.11	-0.6
3,271,199	-		CCNA_03125	0.14	-0.2
3,271,223	+		CCNA_03125	0.16	-0.2
3,271,231	-		CCNA_03125	0.16	+0.9
3,271,254	-		CCNA_03125	0.18	+0.0
3,271,267	+		CCNA_03125	0.19	+0.0
3,271,267	+		CCNA_03125	0.19	-0.1
3,271,275	-		CCNA_03125	0.19	+0.5
3,271,280	-		CCNA_03125	0.20	-1.4
3,271,281	-		CCNA_03125	0.20	+0.8
3,271,294	+		CCNA_03125	0.21	-0.3
3,271,302	-		CCNA_03125	0.21	-0.8
3,271,332	-		CCNA_03125	0.24	+0.4
3,271,336	+		CCNA_03125	0.24	+0.4
3,271,361	-		CCNA_03125	0.26	-1.5
3,271,363	+		CCNA_03125	0.26	+0.9
3,271,366	-		CCNA_03125	0.26	+0.1
3,271,371	-		CCNA_03125	0.26	+0.5
3,271,373	+		CCNA_03125	0.27	-1.0
3,271,373	+		CCNA_03125	0.27	+1.0
3,271,441	+		CCNA_03125	0.31	-2.7
3,271,451	-		CCNA_03125	0.32	+0.0
3,271,468	-		CCNA_03125	0.33	+1.5
3,271,471	-		CCNA_03125	0.34	-0.7
3,271,490	+		CCNA_03125	0.35	+0.6
3,271,496	+		CCNA_03125	0.35	+1.3
3,271,528	+		CCNA_03125	0.38	+1.5
3,271,528	+		CCNA_03125	0.38	+1.7
3,271,536	-		CCNA_03125	0.38	+0.8
3,271,551	+		CCNA_03125	0.39	-0.4
3,271,551	+		CCNA_03125	0.39	+1.0
3,271,551	+		CCNA_03125	0.39	-1.9
3,271,556	+		CCNA_03125	0.40	+0.0
3,271,559	-		CCNA_03125	0.40	-0.9
3,271,584	-		CCNA_03125	0.42	-0.7
3,271,589	+		CCNA_03125	0.42	-0.3
3,271,683	+		CCNA_03125	0.49	-0.2
3,271,688	+		CCNA_03125	0.49	+1.0
3,271,689	-		CCNA_03125	0.49	+0.0
3,271,696	-		CCNA_03125	0.50	+0.3
3,271,714	+		CCNA_03125	0.51	+0.8
3,271,744	-		CCNA_03125	0.53	+0.5
3,271,756	-		CCNA_03125	0.54	+0.1
3,271,756	-		CCNA_03125	0.54	-0.6
3,271,774	-		CCNA_03125	0.55	+1.5
3,271,774	-		CCNA_03125	0.55	+0.3
3,271,800	+		CCNA_03125	0.57	+0.0
3,271,845	-		CCNA_03125	0.60	+0.3
3,271,850	+		CCNA_03125	0.61	+0.6
3,271,865	+		CCNA_03125	0.62	+0.0
3,271,867	+		CCNA_03125	0.62	-0.3
3,271,867	+		CCNA_03125	0.62	-1.3
3,271,867	+		CCNA_03125	0.62	-1.0
3,271,867	+		CCNA_03125	0.62	+0.8
3,271,867	+		CCNA_03125	0.62	-1.5
3,271,875	-		CCNA_03125	0.63	+0.3
3,271,875	-		CCNA_03125	0.63	-0.2
3,271,875	-		CCNA_03125	0.63	-0.7
3,271,877	+		CCNA_03125	0.63	+0.1
3,271,878	+		CCNA_03125	0.63	+0.0
3,271,934	+		CCNA_03125	0.67	-1.4
3,271,940	+		CCNA_03125	0.67	-1.1
3,271,943	-		CCNA_03125	0.67	-0.6
3,271,943	-		CCNA_03125	0.67	-0.9
3,271,947	+		CCNA_03125	0.68	-1.6
3,271,948	-		CCNA_03125	0.68	-0.2
3,271,975	+		CCNA_03125	0.70	-1.7
3,271,976	+		CCNA_03125	0.70	-0.2
3,271,978	-		CCNA_03125	0.70	-0.1
3,271,983	-		CCNA_03125	0.70	-0.6
3,271,983	-		CCNA_03125	0.70	+0.8
3,271,997	+		CCNA_03125	0.71	+0.1
3,272,000	-		CCNA_03125	0.72	-0.9
3,272,006	+		CCNA_03125	0.72	-1.7
3,272,011	+		CCNA_03125	0.72	-1.7
3,272,019	+		CCNA_03125	0.73	+0.4
3,272,019	-		CCNA_03125	0.73	+0.1
3,272,027	-		CCNA_03125	0.73	+0.8
3,272,030	+		CCNA_03125	0.74	-1.7
3,272,057	-		CCNA_03125	0.76	-1.0
3,272,098	-		CCNA_03125	0.79	-0.9
3,272,099	+		CCNA_03125	0.79	-2.0
3,272,107	-		CCNA_03125	0.79	-0.3
3,272,107	-		CCNA_03125	0.79	-0.9
3,272,107	-		CCNA_03125	0.79	+2.3
3,272,116	+		CCNA_03125	0.80	-0.6
3,272,180	-		CCNA_03125	0.84	-0.3
3,272,195	-		CCNA_03125	0.86	-2.1
3,272,196	-		CCNA_03125	0.86	+0.8
3,272,198	+		CCNA_03125	0.86	-1.1
3,272,200	+		CCNA_03125	0.86	+0.2
3,272,200	+		CCNA_03125	0.86	+0.4
3,272,200	+		CCNA_03125	0.86	-0.4
3,272,239	-		CCNA_03125	0.89	+0.3
3,272,275	-				-1.1
3,272,283	+				-1.6
3,272,283	+				-2.2
3,272,293	+				+0.5
3,272,301	-				+0.3
3,272,301	-				+0.7
3,272,301	-				+0.3
3,272,301	-				-0.8
3,272,319	-				-0.4
3,272,319	-				-0.4
3,272,350	-				+0.8
3,272,363	+				-0.6
3,272,371	-				+0.0
3,272,371	-				-1.7
3,272,376	-				+0.4
3,272,376	-				-0.6
3,272,390	-				+1.3
3,272,429	-				-1.7
3,272,443	+				-1.7
3,272,503	+				+0.4
3,272,526	+				+0.0
3,272,554	-				-0.4
3,272,569	+				+0.6
3,272,627	+				-0.7
3,272,645	-				-1.7
3,272,667	+		CCNA_03126	0.10	+0.5
3,272,713	+		CCNA_03126	0.12	-2.3
3,272,724	+		CCNA_03126	0.13	-2.1
3,272,750	-		CCNA_03126	0.14	-1.1
3,272,766	-		CCNA_03126	0.15	-0.2
3,272,770	+		CCNA_03126	0.15	-0.4
3,272,778	-		CCNA_03126	0.15	-0.7
3,272,778	-		CCNA_03126	0.15	-0.4
3,272,778	-		CCNA_03126	0.15	+0.1
3,272,790	-		CCNA_03126	0.16	-0.5
3,272,806	+		CCNA_03126	0.17	-0.7
3,272,811	+		CCNA_03126	0.17	+0.8
3,272,811	-		CCNA_03126	0.17	-0.2
3,272,814	-		CCNA_03126	0.17	+0.8
3,272,821	-		CCNA_03126	0.17	+0.7
3,272,834	+		CCNA_03126	0.18	-1.9
3,272,837	-		CCNA_03126	0.18	+0.7
3,272,839	+		CCNA_03126	0.18	+2.6
3,272,842	-		CCNA_03126	0.18	-0.6
3,272,844	+		CCNA_03126	0.19	+1.2
3,272,847	-		CCNA_03126	0.19	-0.6
3,272,872	+		CCNA_03126	0.20	+1.3
3,272,877	+		CCNA_03126	0.20	-1.2
3,272,880	-		CCNA_03126	0.20	-0.3
3,272,885	-		CCNA_03126	0.21	+1.2
3,272,914	-		CCNA_03126	0.22	-2.6
3,272,939	+		CCNA_03126	0.23	-0.4
3,272,939	+		CCNA_03126	0.23	-0.2
3,272,947	-		CCNA_03126	0.24	-0.9
3,272,947	-		CCNA_03126	0.24	+0.7
3,272,947	-		CCNA_03126	0.24	-0.8
3,272,947	-		CCNA_03126	0.24	-0.7
3,272,949	+		CCNA_03126	0.24	-1.6
3,272,957	-		CCNA_03126	0.24	+0.1
3,272,964	-		CCNA_03126	0.24	-1.7
3,272,966	+		CCNA_03126	0.25	-1.2
3,272,971	+		CCNA_03126	0.25	-0.9
3,272,971	+		CCNA_03126	0.25	+1.0
3,272,971	+		CCNA_03126	0.25	-0.7
3,272,971	+		CCNA_03126	0.25	-1.0
3,272,979	-		CCNA_03126	0.25	-1.8
3,272,979	-		CCNA_03126	0.25	-0.2
3,272,979	-		CCNA_03126	0.25	+1.5
3,272,979	-		CCNA_03126	0.25	-0.2
3,272,979	-		CCNA_03126	0.25	-1.7
3,273,026	+		CCNA_03126	0.27	-0.1
3,273,038	+		CCNA_03126	0.28	+1.8
3,273,044	-		CCNA_03126	0.28	-0.0
3,273,099	+		CCNA_03126	0.31	-0.5
3,273,099	+		CCNA_03126	0.31	-1.8
3,273,099	+		CCNA_03126	0.31	-1.1
3,273,099	+		CCNA_03126	0.31	-0.4
3,273,099	-		CCNA_03126	0.31	+0.7
3,273,107	-		CCNA_03126	0.31	-1.4
3,273,107	-		CCNA_03126	0.31	-0.6
3,273,107	-		CCNA_03126	0.31	+0.9
3,273,107	-		CCNA_03126	0.31	-1.0
3,273,107	-		CCNA_03126	0.31	-1.1
3,273,107	-		CCNA_03126	0.31	+0.0
3,273,124	-		CCNA_03126	0.32	-1.8
3,273,155	-		CCNA_03126	0.34	+0.5
3,273,158	+		CCNA_03126	0.34	-1.5
3,273,161	+		CCNA_03126	0.34	-0.2
3,273,173	-		CCNA_03126	0.35	-0.8
3,273,189	-		CCNA_03126	0.35	+0.0
3,273,204	+		CCNA_03126	0.36	-1.3
3,273,204	+		CCNA_03126	0.36	-0.5
3,273,204	+		CCNA_03126	0.36	-0.1
3,273,204	+		CCNA_03126	0.36	+2.5
3,273,204	+		CCNA_03126	0.36	-2.1
3,273,204	+		CCNA_03126	0.36	-1.1
3,273,204	+		CCNA_03126	0.36	-0.0
3,273,212	-		CCNA_03126	0.36	-0.5
3,273,212	-		CCNA_03126	0.36	-0.1
3,273,212	-		CCNA_03126	0.36	+0.4
3,273,212	-		CCNA_03126	0.36	-0.9
3,273,212	-		CCNA_03126	0.36	+1.1
3,273,232	+		CCNA_03126	0.37	-2.2
3,273,232	+		CCNA_03126	0.37	-1.4
3,273,242	+		CCNA_03126	0.38	-0.6
3,273,250	-		CCNA_03126	0.38	-1.0
3,273,250	-		CCNA_03126	0.38	+1.8
3,273,308	+		CCNA_03126	0.41	+1.3
3,273,359	+		CCNA_03126	0.44	+1.0
3,273,377	+		CCNA_03126	0.44	-0.6
3,273,378	+		CCNA_03126	0.44	+0.0
3,273,383	+		CCNA_03126	0.45	-1.4
3,273,385	-		CCNA_03126	0.45	+1.0
3,273,386	-		CCNA_03126	0.45	-1.0
3,273,386	-		CCNA_03126	0.45	-0.9
3,273,391	-		CCNA_03126	0.45	-1.3