Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02059

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
2,207,921	-		CCNA_02058	0.26	-2.0
2,208,000	+		CCNA_02058	0.32	-1.1
2,208,001	+		CCNA_02058	0.32	-2.1
2,208,009	-		CCNA_02058	0.33	-1.0
2,208,122	-		CCNA_02058	0.42	+0.0
2,208,189	+		CCNA_02058	0.47	+0.8
2,208,189	+		CCNA_02058	0.47	-0.4
2,208,194	+		CCNA_02058	0.48	-1.4
2,208,194	+		CCNA_02058	0.48	+0.2
2,208,194	+		CCNA_02058	0.48	-0.5
2,208,197	-		CCNA_02058	0.48	-1.2
2,208,197	-		CCNA_02058	0.48	-0.3
2,208,202	-		CCNA_02058	0.49	+0.8
2,208,240	-		CCNA_02058	0.52	-0.7
2,208,313	-		CCNA_02058	0.58	+0.0
2,208,323	-		CCNA_02058	0.58	-0.5
2,208,324	-		CCNA_02058	0.58	-1.2
2,208,358	-		CCNA_02058	0.61	-0.8
2,208,468	+		CCNA_02058	0.70	+1.2
2,208,468	+		CCNA_02058	0.70	+0.3
2,208,497	-		CCNA_02058	0.73	-1.0
2,208,581	+		CCNA_02058	0.79	+0.5
2,208,581	+		CCNA_02058	0.79	-0.7
2,208,581	+		CCNA_02058	0.79	+0.6
2,208,584	-		CCNA_02058	0.80	-2.9
2,208,586	+		CCNA_02058	0.80	+0.3
2,208,594	-		CCNA_02058	0.81	+0.3
2,208,594	-		CCNA_02058	0.81	+1.0
2,208,606	-		CCNA_02058	0.82	+0.2
2,208,608	+		CCNA_02058	0.82	-2.1
2,208,616	-		CCNA_02058	0.82	-0.5
2,208,616	-		CCNA_02058	0.82	-1.6
2,208,616	-		CCNA_02058	0.82	-1.9
2,208,664	-		CCNA_02058	0.86	-0.6
2,208,707	+		CCNA_02058	0.90	+0.1
2,208,715	-				-1.3
2,208,726	+				-1.2
2,208,726	+				+1.0
2,208,726	+				-1.2
2,208,726	+				+1.9
2,208,726	+				-0.6
2,208,726	+				-0.7
2,208,726	+				-0.9
2,208,732	-				-1.9
2,208,734	-				+0.1
2,208,734	-				-0.2
2,208,734	-				-0.1
2,208,734	-				+0.8
2,208,734	-				-0.5
2,208,734	-				-0.6
2,208,754	+				+0.6
2,208,769	+				-0.3
2,208,769	+				+1.0
2,208,777	-				-2.3
2,208,777	-				-1.5
2,208,781	+				-1.4
2,208,804	+				-1.7
2,208,804	+				+0.5
2,208,812	-				-1.2
2,208,812	-				-1.0
2,208,823	-				-1.4
2,208,825	+				-0.5
2,208,825	+				-0.7
2,208,825	+				-1.6
2,208,825	+				+1.0
2,208,825	+				-2.2
2,208,833	-				-0.7
2,208,833	-				-1.4
2,208,833	-				+0.6
2,208,833	-				-1.0
2,208,833	-				-0.5
2,208,833	-				-2.4
2,208,834	-				-1.8
2,208,866	-				+0.9
2,208,866	-				+0.6
2,208,920	-				+0.4
2,208,993	-				+3.4
2,209,108	+		CCNA_02059	0.21	+1.8
2,209,123	+		CCNA_02059	0.22	+0.3
2,209,131	-		CCNA_02059	0.23	+2.7
2,209,148	-		CCNA_02059	0.25	+2.8
2,209,197	-		CCNA_02059	0.30	+4.2
2,209,197	-		CCNA_02059	0.30	+2.5
2,209,197	-		CCNA_02059	0.30	+3.2
2,209,263	+		CCNA_02059	0.37	+1.9
2,209,263	+		CCNA_02059	0.37	+1.5
2,209,271	-		CCNA_02059	0.37	+2.2
2,209,326	-		CCNA_02059	0.43	+1.9
2,209,442	-		CCNA_02059	0.55	+0.7
2,209,442	-		CCNA_02059	0.55	+2.0
2,209,496	+		CCNA_02059	0.60	+1.0
2,209,504	-		CCNA_02059	0.61	+2.5
2,209,515	+		CCNA_02059	0.62	-0.3
2,209,564	-		CCNA_02059	0.67	+1.8
2,209,578	+		CCNA_02059	0.68	-0.2
2,209,586	-		CCNA_02059	0.69	+2.1
2,209,607	-		CCNA_02059	0.71	+4.3
2,209,711	-		CCNA_02059	0.82	+0.3
2,209,731	-		CCNA_02059	0.84	+2.9
2,209,736	-		CCNA_02059	0.84	+2.8
2,209,755	+		CCNA_02059	0.86	+2.4
2,209,755	+		CCNA_02059	0.86	+2.5
2,209,760	+		CCNA_02059	0.86	+2.1
2,209,792	-		CCNA_02059	0.90	+0.6
2,209,809	+				+1.9
2,209,819	+				+0.4
2,209,850	-				+0.6
2,209,922	+				-1.1
2,209,975	+		CCNA_02060	0.22	-1.3
2,209,978	-		CCNA_02060	0.23	-0.1
2,210,007	+		CCNA_02060	0.30	+0.6
2,210,126	-		CCNA_02060	0.61	-0.6
2,210,128	+		CCNA_02060	0.62	+1.3
2,210,164	-		CCNA_02060	0.71	+0.0
2,210,165	+		CCNA_02060	0.71	-0.9
2,210,219	-		CCNA_02060	0.85	+0.8
2,210,219	-		CCNA_02060	0.85	+0.6
2,210,239	-				-0.1
2,210,277	-				-0.7
2,210,302	-				-1.5
2,210,318	-				-1.0
2,210,351	+				-0.6
2,210,351	+				-1.7
2,210,396	-				-1.5
2,210,408	+				-0.7
2,210,416	-				+0.0
2,210,441	+				+1.3
2,210,443	+				-2.3
2,210,449	-				-0.8
2,210,451	+				+0.6
2,210,451	-				-2.6
2,210,535	+				-0.5
2,210,553	+				-0.6
2,210,609	+		CCNA_02061	0.14	+1.8
2,210,609	+		CCNA_02061	0.14	-2.2
2,210,609	+		CCNA_02061	0.14	+0.1
2,210,616	-		CCNA_02061	0.14	-1.7
2,210,617	-		CCNA_02061	0.15	-1.3
2,210,624	-		CCNA_02061	0.15	+0.8
2,210,652	+		CCNA_02061	0.17	+0.6
2,210,652	+		CCNA_02061	0.17	+0.5
2,210,652	+		CCNA_02061	0.17	+0.8
2,210,708	+		CCNA_02061	0.22	-0.2
2,210,711	-		CCNA_02061	0.22	+1.3
2,210,711	-		CCNA_02061	0.22	+0.0
2,210,713	+		CCNA_02061	0.22	-0.8
2,210,721	-		CCNA_02061	0.23	-0.6
2,210,744	-		CCNA_02061	0.25	-0.3
2,210,746	+		CCNA_02061	0.25	-0.8
2,210,746	+		CCNA_02061	0.25	+2.6
2,210,756	+		CCNA_02061	0.26	-0.1
2,210,756	+		CCNA_02061	0.26	+2.0
2,210,764	-		CCNA_02061	0.27	-1.5
2,210,839	+		CCNA_02061	0.33	-0.4
2,210,847	-		CCNA_02061	0.33	+0.1
2,210,847	-		CCNA_02061	0.33	-0.9