Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01625

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
1,744,771	+		CCNA_01623	0.61	+0.5
1,744,773	+		CCNA_01623	0.62	-2.1
1,744,781	-		CCNA_01623	0.64	+1.9
1,744,821	+		CCNA_01623	0.73	+1.3
1,744,829	-		CCNA_01623	0.75	-0.1
1,744,869	-		CCNA_01623	0.85	+0.6
1,744,871	+		CCNA_01623	0.85	-0.7
1,744,871	+		CCNA_01623	0.85	-1.3
1,744,879	-		CCNA_01623	0.87	+1.9
1,744,887	-		CCNA_01623	0.89	-0.2
1,744,966	-				+0.1
1,745,004	-				-1.7
1,745,072	+				+2.2
1,745,094	+		CCNA_01624	0.14	+2.2
1,745,125	+		CCNA_01624	0.19	+2.1
1,745,165	+		CCNA_01624	0.26	+2.5
1,745,165	-		CCNA_01624	0.26	+0.7
1,745,178	-		CCNA_01624	0.28	-1.6
1,745,207	-		CCNA_01624	0.33	-0.9
1,745,212	-		CCNA_01624	0.34	+1.2
1,745,244	-		CCNA_01624	0.39	+2.9
1,745,244	-				+2.9
1,745,285	-		CCNA_01624	0.46	-0.9
1,745,356	+		CCNA_01624	0.58	+2.8
1,745,356	+		CCNA_01624	0.58	+2.5
1,745,390	-		CCNA_01624	0.64	+0.5
1,745,606	+				+0.7
1,745,622	+				+1.0
1,745,629	-				-2.4
1,745,757	+				+0.9
1,745,757	+				+1.2
1,745,757	+				+2.4
1,745,763	+				+0.5
1,745,765	-				+1.5
1,745,765	-				+0.5
1,745,768	+				+0.3
1,745,768	+				+0.7
1,745,770	-				-0.1
1,745,816	+				+0.3
1,745,834	-				-1.3
1,745,834	-				-0.2
1,745,837	+				-1.4
1,745,916	-				-0.2
1,745,933	+		CCNA_01625	0.10	-0.2
1,745,946	-		CCNA_01625	0.11	+1.0
1,745,953	+		CCNA_01625	0.11	+0.2
1,745,959	-		CCNA_01625	0.12	+0.7
1,745,961	-		CCNA_01625	0.12	-0.5
1,745,961	-		CCNA_01625	0.12	-0.6
1,745,966	+		CCNA_01625	0.12	-0.2
1,745,973	-		CCNA_01625	0.13	-0.8
1,746,005	+		CCNA_01625	0.15	-0.2
1,746,007	-		CCNA_01625	0.15	-2.2
1,746,023	-		CCNA_01625	0.16	-1.4
1,746,024	+		CCNA_01625	0.16	+0.5
1,746,029	+		CCNA_01625	0.16	-0.0
1,746,033	-		CCNA_01625	0.16	-0.1
1,746,033	-		CCNA_01625	0.16	-1.3
1,746,048	+		CCNA_01625	0.17	-0.8
1,746,056	-		CCNA_01625	0.18	+1.1
1,746,056	-		CCNA_01625	0.18	-1.6
1,746,078	-		CCNA_01625	0.19	+1.9
1,746,107	+		CCNA_01625	0.21	+0.9
1,746,112	+		CCNA_01625	0.21	-1.8
1,746,115	-		CCNA_01625	0.21	-0.6
1,746,134	-		CCNA_01625	0.22	-0.9
1,746,170	+		CCNA_01625	0.25	-1.3
1,746,236	+		CCNA_01625	0.29	-0.5
1,746,249	+		CCNA_01625	0.30	+1.8
1,746,283	+		CCNA_01625	0.32	-0.4
1,746,283	+		CCNA_01625	0.32	+0.7
1,746,291	-		CCNA_01625	0.32	-1.5
1,746,291	-		CCNA_01625	0.32	-1.6
1,746,293	+		CCNA_01625	0.32	+1.0
1,746,299	+		CCNA_01625	0.33	+1.7
1,746,301	-		CCNA_01625	0.33	-0.4
1,746,314	+		CCNA_01625	0.34	+0.9
1,746,347	+		CCNA_01625	0.36	-0.1
1,746,376	-		CCNA_01625	0.37	-0.8
1,746,378	+		CCNA_01625	0.38	+1.5
1,746,386	-		CCNA_01625	0.38	-0.5
1,746,409	-		CCNA_01625	0.39	-0.9
1,746,409	-		CCNA_01625	0.39	+0.1
1,746,424	-		CCNA_01625	0.40	+0.5
1,746,492	+		CCNA_01625	0.45	-0.4
1,746,492	+		CCNA_01625	0.45	-0.8
1,746,545	+		CCNA_01625	0.48	-0.4
1,746,545	+		CCNA_01625	0.48	+1.5
1,746,545	+		CCNA_01625	0.48	-1.3
1,746,545	+		CCNA_01625	0.48	-0.3
1,746,545	+		CCNA_01625	0.48	-1.7
1,746,545	+		CCNA_01625	0.48	-1.9
1,746,545	+		CCNA_01625	0.48	-0.5
1,746,545	+		CCNA_01625	0.48	+2.4
1,746,545	+		CCNA_01625	0.48	+1.9
1,746,553	-		CCNA_01625	0.48	+0.1
1,746,553	-		CCNA_01625	0.48	-1.2
1,746,553	-		CCNA_01625	0.48	+1.7
1,746,553	-		CCNA_01625	0.48	-0.7
1,746,553	-		CCNA_01625	0.48	-0.7
1,746,553	-		CCNA_01625	0.48	+1.5
1,746,553	-		CCNA_01625	0.48	-0.8
1,746,553	-		CCNA_01625	0.48	+0.5
1,746,553	-		CCNA_01625	0.48	-0.7
1,746,553	-		CCNA_01625	0.48	+0.8
1,746,553	-		CCNA_01625	0.48	-0.3
1,746,571	+		CCNA_01625	0.49	+0.7
1,746,591	+		CCNA_01625	0.51	-0.8
1,746,591	+		CCNA_01625	0.51	-0.0
1,746,604	-		CCNA_01625	0.51	-0.8
1,746,629	+		CCNA_01625	0.53	+2.7
1,746,648	+		CCNA_01625	0.54	+0.3
1,746,724	+		CCNA_01625	0.59	+0.9
1,746,724	+		CCNA_01625	0.59	+0.2
1,746,732	-		CCNA_01625	0.59	+0.1
1,746,732	-		CCNA_01625	0.59	-2.5
1,746,732	-		CCNA_01625	0.59	-0.9
1,746,738	-		CCNA_01625	0.60	+1.3
1,746,745	-		CCNA_01625	0.60	-0.3
1,746,747	+		CCNA_01625	0.60	-0.2
1,746,755	-		CCNA_01625	0.61	+0.7
1,746,789	-		CCNA_01625	0.63	+0.5
1,746,803	+		CCNA_01625	0.64	-0.7
1,746,803	+		CCNA_01625	0.64	-1.3
1,746,805	+		CCNA_01625	0.64	-1.3
1,746,811	-		CCNA_01625	0.64	-1.8
1,746,811	-		CCNA_01625	0.64	-0.7
1,746,813	-		CCNA_01625	0.64	-1.1
1,746,813	-		CCNA_01625	0.64	-0.9
1,746,825	+		CCNA_01625	0.65	-0.3
1,746,825	+		CCNA_01625	0.65	-0.4
1,746,825	+		CCNA_01625	0.65	-0.7
1,746,825	+		CCNA_01625	0.65	+0.3
1,746,825	+		CCNA_01625	0.65	+1.5
1,746,827	+		CCNA_01625	0.65	-1.1
1,746,827	+		CCNA_01625	0.65	+0.8
1,746,827	+		CCNA_01625	0.65	-2.0
1,746,827	+		CCNA_01625	0.65	-0.7
1,746,827	+		CCNA_01625	0.65	-0.8
1,746,827	+		CCNA_01625	0.65	-0.5
1,746,827	+		CCNA_01625	0.65	-0.3
1,746,835	-		CCNA_01625	0.66	-2.2
1,746,835	-		CCNA_01625	0.66	+1.1
1,746,835	-				+2.9
1,746,835	-		CCNA_01625	0.66	-1.9
1,746,852	-		CCNA_01625	0.67	-1.8
1,746,860	-		CCNA_01625	0.67	-1.3
1,746,874	-		CCNA_01625	0.68	-0.1
1,746,881	-		CCNA_01625	0.69	-2.5
1,746,881	-		CCNA_01625	0.69	-0.2
1,746,938	+		CCNA_01625	0.72	-1.7
1,746,956	-		CCNA_01625	0.73	-0.3
1,746,980	-		CCNA_01625	0.75	-0.1
1,747,004	-		CCNA_01625	0.76	-1.5
1,747,004	-		CCNA_01625	0.76	+0.3
1,747,004	-		CCNA_01625	0.76	+2.6
1,747,028	+		CCNA_01625	0.78	-0.0
1,747,054	+		CCNA_01625	0.79	-0.9
1,747,073	-		CCNA_01625	0.80	-0.2
1,747,214	+		CCNA_01625	0.89	-0.1
1,747,253	-				-0.0
1,747,297	-				-1.1
1,747,353	+				+1.1
1,747,361	-				-1.6
1,747,361	-				-0.7
1,747,384	-				-2.6
1,747,390	+				+0.7
1,747,390	+				-1.0
1,747,440	+				-0.5
1,747,442	-				-0.6
1,747,442	-				-1.8
1,747,478	+				+1.9
1,747,486	-				-0.7
1,747,488	+				+0.4
1,747,494	+				+0.7
1,747,530	+				-0.3
1,747,530	+				+1.1
1,747,532	-				-0.0
1,747,538	-				+4.3
1,748,308	+				+1.7
1,748,321	-				-1.5
1,748,326	+				+0.0