Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS22630 and CA265_RS22635 overlap by 1 nucleotides CA265_RS22635 and CA265_RS22640 are separated by 237 nucleotides
CA265_RS22630: CA265_RS22630 - nucleoside-diphosphate sugar epimerase, at 5,541,271 to 5,542,233
_RS22630
CA265_RS22635: CA265_RS22635 - phosphoserine phosphatase (EC 3.1.3.3) <small>(from data)</small>, at 5,542,233 to 5,543,534
_RS22635
CA265_RS22640: CA265_RS22640 - chloride channel protein, at 5,543,772 to 5,545,061
_RS22640
Position (kb) 5542
5543
5544 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5541.314 kb on + strand at 5541.497 kb on + strand, within CA265_RS22630 at 5541.542 kb on + strand, within CA265_RS22630 at 5541.542 kb on + strand, within CA265_RS22630 at 5541.830 kb on + strand, within CA265_RS22630 at 5541.831 kb on - strand, within CA265_RS22630 at 5541.852 kb on + strand, within CA265_RS22630 at 5542.130 kb on + strand, within CA265_RS22630 at 5542.137 kb on - strand at 5542.144 kb on + strand at 5542.155 kb on + strand at 5542.231 kb on + strand at 5542.232 kb on - strand at 5542.370 kb on + strand, within CA265_RS22635 at 5542.546 kb on + strand, within CA265_RS22635 at 5542.616 kb on + strand, within CA265_RS22635 at 5542.724 kb on - strand, within CA265_RS22635 at 5543.079 kb on - strand, within CA265_RS22635 at 5543.128 kb on + strand, within CA265_RS22635 at 5543.508 kb on - strand at 5543.580 kb on - strand at 5543.681 kb on + strand at 5543.681 kb on + strand at 5543.742 kb on + strand at 5543.743 kb on - strand at 5543.863 kb on + strand at 5543.919 kb on + strand, within CA265_RS22640 at 5543.928 kb on - strand, within CA265_RS22640 at 5543.933 kb on + strand, within CA265_RS22640 at 5544.114 kb on + strand, within CA265_RS22640 at 5544.115 kb on - strand, within CA265_RS22640 at 5544.131 kb on + strand, within CA265_RS22640 at 5544.132 kb on - strand, within CA265_RS22640 at 5544.232 kb on - strand, within CA265_RS22640 at 5544.334 kb on - strand, within CA265_RS22640 at 5544.337 kb on - strand, within CA265_RS22640 at 5544.358 kb on - strand, within CA265_RS22640 at 5544.360 kb on + strand, within CA265_RS22640 at 5544.435 kb on - strand, within CA265_RS22640 at 5544.437 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 5,541,314 + -0.8 5,541,497 + CA265_RS22630 0.23 +0.1 5,541,542 + CA265_RS22630 0.28 +0.5 5,541,542 + CA265_RS22630 0.28 -1.7 5,541,830 + CA265_RS22630 0.58 -1.6 5,541,831 - CA265_RS22630 0.58 +1.3 5,541,852 + CA265_RS22630 0.60 -1.3 5,542,130 + CA265_RS22630 0.89 -0.3 5,542,137 - -1.8 5,542,144 + +2.4 5,542,155 + -0.9 5,542,231 + -1.8 5,542,232 - -0.6 5,542,370 + CA265_RS22635 0.11 -1.1 5,542,546 + CA265_RS22635 0.24 -0.7 5,542,616 + CA265_RS22635 0.29 +2.6 5,542,724 - CA265_RS22635 0.38 -2.5 5,543,079 - CA265_RS22635 0.65 +0.6 5,543,128 + CA265_RS22635 0.69 +1.6 5,543,508 - -0.8 5,543,580 - -0.3 5,543,681 + -1.2 5,543,681 + +0.0 5,543,742 + -1.0 5,543,743 - +0.1 5,543,863 + +1.7 5,543,919 + CA265_RS22640 0.11 +1.3 5,543,928 - CA265_RS22640 0.12 -0.7 5,543,933 + CA265_RS22640 0.12 +0.0 5,544,114 + CA265_RS22640 0.27 +1.6 5,544,115 - CA265_RS22640 0.27 +2.0 5,544,131 + CA265_RS22640 0.28 -0.3 5,544,132 - CA265_RS22640 0.28 -1.0 5,544,232 - CA265_RS22640 0.36 +0.7 5,544,334 - CA265_RS22640 0.44 +0.4 5,544,337 - CA265_RS22640 0.44 +1.1 5,544,358 - CA265_RS22640 0.45 -1.0 5,544,360 + CA265_RS22640 0.46 +0.9 5,544,435 - CA265_RS22640 0.51 -2.2 5,544,437 - +0.7
Or see this region's nucleotide sequence