Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS16150 and CA265_RS16155 are separated by 234 nucleotides CA265_RS16155 and CA265_RS16160 overlap by 4 nucleotides CA265_RS16160 and CA265_RS16165 are separated by 11 nucleotides
CA265_RS16150: CA265_RS16150 - UDP-diphosphatase, at 4,055,985 to 4,056,779
_RS16150
CA265_RS16155: CA265_RS16155 - tRNA pseudouridine(55) synthase TruB, at 4,057,014 to 4,057,745
_RS16155
CA265_RS16160: CA265_RS16160 - hypothetical protein, at 4,057,742 to 4,058,602
_RS16160
CA265_RS16165: CA265_RS16165 - riboflavin biosynthesis protein RibF, at 4,058,614 to 4,059,600
_RS16165
Position (kb)
4057
4058
4059 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4056.773 kb on + strand at 4056.791 kb on - strand at 4056.791 kb on - strand at 4056.791 kb on - strand at 4056.823 kb on - strand at 4056.826 kb on + strand at 4056.892 kb on - strand at 4057.076 kb on + strand at 4057.076 kb on + strand at 4057.171 kb on + strand, within CA265_RS16155 at 4057.172 kb on - strand, within CA265_RS16155 at 4057.172 kb on - strand, within CA265_RS16155 at 4057.172 kb on - strand, within CA265_RS16155 at 4057.199 kb on + strand, within CA265_RS16155 at 4057.199 kb on + strand, within CA265_RS16155 at 4057.216 kb on + strand, within CA265_RS16155 at 4057.229 kb on - strand, within CA265_RS16155 at 4057.259 kb on + strand, within CA265_RS16155 at 4057.340 kb on + strand, within CA265_RS16155 at 4057.390 kb on + strand, within CA265_RS16155 at 4057.391 kb on - strand, within CA265_RS16155 at 4057.391 kb on - strand, within CA265_RS16155 at 4057.448 kb on - strand, within CA265_RS16155 at 4057.570 kb on - strand, within CA265_RS16155 at 4057.570 kb on - strand, within CA265_RS16155 at 4057.684 kb on + strand at 4057.684 kb on + strand at 4057.694 kb on + strand at 4057.774 kb on + strand at 4057.900 kb on - strand, within CA265_RS16160 at 4057.914 kb on + strand, within CA265_RS16160 at 4057.957 kb on - strand, within CA265_RS16160 at 4058.165 kb on + strand, within CA265_RS16160 at 4058.270 kb on + strand, within CA265_RS16160 at 4058.275 kb on + strand, within CA265_RS16160 at 4058.275 kb on + strand, within CA265_RS16160 at 4058.286 kb on - strand, within CA265_RS16160 at 4058.290 kb on - strand, within CA265_RS16160 at 4058.336 kb on + strand, within CA265_RS16160 at 4058.464 kb on + strand, within CA265_RS16160 at 4059.601 kb on + strand at 4059.602 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,056,773 + +1.0 4,056,791 - -0.9 4,056,791 - +1.2 4,056,791 - +0.7 4,056,823 - -0.2 4,056,826 + +0.4 4,056,892 - +0.3 4,057,076 + +0.6 4,057,076 + -0.9 4,057,171 + CA265_RS16155 0.21 +1.6 4,057,172 - CA265_RS16155 0.22 -1.2 4,057,172 - CA265_RS16155 0.22 -1.0 4,057,172 - CA265_RS16155 0.22 -0.7 4,057,199 + CA265_RS16155 0.25 -2.3 4,057,199 + CA265_RS16155 0.25 +3.0 4,057,216 + CA265_RS16155 0.28 -0.0 4,057,229 - CA265_RS16155 0.29 -2.0 4,057,259 + CA265_RS16155 0.33 -0.6 4,057,340 + CA265_RS16155 0.45 +0.1 4,057,390 + CA265_RS16155 0.51 +0.8 4,057,391 - CA265_RS16155 0.52 -0.8 4,057,391 - CA265_RS16155 0.52 +0.7 4,057,448 - CA265_RS16155 0.59 +1.6 4,057,570 - CA265_RS16155 0.76 +0.0 4,057,570 - CA265_RS16155 0.76 -0.9 4,057,684 + -0.4 4,057,684 + +0.6 4,057,694 + +0.5 4,057,774 + +0.2 4,057,900 - CA265_RS16160 0.18 +0.7 4,057,914 + CA265_RS16160 0.20 -1.3 4,057,957 - CA265_RS16160 0.25 +0.5 4,058,165 + CA265_RS16160 0.49 +0.5 4,058,270 + CA265_RS16160 0.61 +0.3 4,058,275 + CA265_RS16160 0.62 +1.6 4,058,275 + CA265_RS16160 0.62 +1.5 4,058,286 - CA265_RS16160 0.63 -0.6 4,058,290 - CA265_RS16160 0.64 +0.6 4,058,336 + CA265_RS16160 0.69 -0.3 4,058,464 + CA265_RS16160 0.84 +0.8 4,059,601 + -1.7 4,059,602 - -1.2
Or see this region's nucleotide sequence