Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS14645 and CA265_RS14650 overlap by 4 nucleotides CA265_RS14650 and CA265_RS14655 are separated by 514 nucleotides CA265_RS14655 and CA265_RS14660 are separated by 86 nucleotides
CA265_RS14645: CA265_RS14645 - hypothetical protein, at 3,685,589 to 3,685,795
_RS14645
CA265_RS14650: CA265_RS14650 - thiol-disulfide oxidoreductase, at 3,685,792 to 3,686,193
_RS14650
CA265_RS14655: CA265_RS14655 - bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase, at 3,686,708 to 3,687,262
_RS14655
CA265_RS14660: CA265_RS14660 - aspartate carbamoyltransferase, at 3,687,349 to 3,688,284
_RS14660
Position (kb)
3686
3687
3688 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3685.716 kb on + strand, within CA265_RS14645 at 3685.721 kb on - strand, within CA265_RS14645 at 3685.743 kb on + strand, within CA265_RS14645 at 3685.887 kb on - strand, within CA265_RS14650 at 3685.928 kb on + strand, within CA265_RS14650 at 3685.929 kb on - strand, within CA265_RS14650 at 3685.970 kb on - strand, within CA265_RS14650 at 3686.026 kb on + strand, within CA265_RS14650 at 3686.026 kb on + strand, within CA265_RS14650 at 3686.027 kb on - strand, within CA265_RS14650 at 3686.027 kb on - strand, within CA265_RS14650 at 3686.193 kb on + strand at 3686.194 kb on - strand at 3686.206 kb on + strand at 3686.224 kb on + strand at 3686.224 kb on + strand at 3686.228 kb on + strand at 3686.244 kb on - strand at 3686.247 kb on - strand at 3686.261 kb on + strand at 3686.330 kb on - strand at 3686.352 kb on - strand at 3686.395 kb on + strand at 3686.685 kb on + strand at 3686.687 kb on + strand at 3686.687 kb on + strand at 3686.749 kb on + strand at 3686.755 kb on + strand at 3686.755 kb on + strand at 3686.911 kb on + strand, within CA265_RS14655 at 3686.914 kb on + strand, within CA265_RS14655 at 3687.021 kb on + strand, within CA265_RS14655 at 3687.174 kb on + strand, within CA265_RS14655 at 3687.189 kb on + strand, within CA265_RS14655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,685,716 + CA265_RS14645 0.61 -0.2 3,685,721 - CA265_RS14645 0.64 +0.4 3,685,743 + CA265_RS14645 0.74 -0.2 3,685,887 - CA265_RS14650 0.24 -1.1 3,685,928 + CA265_RS14650 0.34 -0.1 3,685,929 - CA265_RS14650 0.34 +0.6 3,685,970 - CA265_RS14650 0.44 +0.8 3,686,026 + CA265_RS14650 0.58 -1.5 3,686,026 + CA265_RS14650 0.58 -1.4 3,686,027 - CA265_RS14650 0.58 -1.7 3,686,027 - CA265_RS14650 0.58 -0.9 3,686,193 + -0.1 3,686,194 - -0.0 3,686,206 + -0.8 3,686,224 + +0.1 3,686,224 + -0.2 3,686,228 + +0.1 3,686,244 - -0.3 3,686,247 - -0.2 3,686,261 + +2.0 3,686,330 - -0.4 3,686,352 - +0.4 3,686,395 + +0.6 3,686,685 + -0.5 3,686,687 + -0.3 3,686,687 + +1.1 3,686,749 + -0.7 3,686,755 + -0.5 3,686,755 + -0.2 3,686,911 + CA265_RS14655 0.37 +0.3 3,686,914 + CA265_RS14655 0.37 -1.1 3,687,021 + CA265_RS14655 0.56 +0.4 3,687,174 + CA265_RS14655 0.84 -1.2 3,687,189 + CA265_RS14655 0.87 -2.1
Or see this region's nucleotide sequence