Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS07510 and CA265_RS07515 are separated by 986 nucleotides CA265_RS07515 and CA265_RS07520 are separated by 167 nucleotides
CA265_RS07510: CA265_RS07510 - ABC transporter, at 1,891,482 to 1,892,726
_RS07510
CA265_RS07515: CA265_RS07515 - pyridoxal phosphate-dependent aminotransferase, at 1,893,713 to 1,894,855
_RS07515
CA265_RS07520: CA265_RS07520 - cation diffusion facilitator family transporter, at 1,895,023 to 1,896,009
_RS07520
Position (kb)
1893
1894
1895 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1892.828 kb on - strand at 1892.913 kb on + strand at 1892.920 kb on + strand at 1892.922 kb on + strand at 1892.963 kb on + strand at 1893.051 kb on - strand at 1893.058 kb on - strand at 1893.059 kb on + strand at 1893.060 kb on - strand at 1893.101 kb on - strand at 1893.208 kb on + strand at 1893.237 kb on - strand at 1893.252 kb on - strand at 1893.276 kb on + strand at 1893.331 kb on + strand at 1893.332 kb on - strand at 1893.483 kb on - strand at 1893.524 kb on + strand at 1893.525 kb on - strand at 1893.552 kb on + strand at 1893.628 kb on + strand at 1893.629 kb on - strand at 1893.631 kb on - strand at 1893.637 kb on - strand at 1893.649 kb on + strand at 1893.649 kb on + strand at 1893.650 kb on - strand at 1893.658 kb on + strand at 1893.720 kb on - strand at 1893.728 kb on + strand at 1893.749 kb on + strand at 1893.750 kb on - strand at 1893.802 kb on + strand at 1893.803 kb on - strand at 1893.803 kb on - strand at 1893.836 kb on + strand, within CA265_RS07515 at 1893.836 kb on + strand, within CA265_RS07515 at 1893.837 kb on - strand, within CA265_RS07515 at 1893.859 kb on - strand, within CA265_RS07515 at 1894.136 kb on - strand, within CA265_RS07515 at 1894.167 kb on + strand, within CA265_RS07515 at 1894.167 kb on + strand, within CA265_RS07515 at 1894.172 kb on + strand, within CA265_RS07515 at 1894.214 kb on + strand, within CA265_RS07515 at 1894.238 kb on - strand, within CA265_RS07515 at 1894.238 kb on - strand, within CA265_RS07515 at 1894.256 kb on - strand, within CA265_RS07515 at 1894.309 kb on + strand, within CA265_RS07515 at 1894.311 kb on + strand, within CA265_RS07515 at 1894.312 kb on - strand, within CA265_RS07515 at 1894.315 kb on + strand, within CA265_RS07515 at 1894.315 kb on + strand, within CA265_RS07515 at 1894.363 kb on + strand, within CA265_RS07515 at 1894.364 kb on - strand, within CA265_RS07515 at 1894.409 kb on + strand, within CA265_RS07515 at 1894.481 kb on - strand, within CA265_RS07515 at 1894.527 kb on + strand, within CA265_RS07515 at 1894.644 kb on + strand, within CA265_RS07515 at 1894.645 kb on - strand, within CA265_RS07515 at 1894.645 kb on - strand, within CA265_RS07515 at 1894.727 kb on - strand, within CA265_RS07515 at 1894.859 kb on - strand at 1894.917 kb on + strand at 1894.969 kb on + strand at 1895.127 kb on - strand, within CA265_RS07520 at 1895.150 kb on + strand, within CA265_RS07520 at 1895.159 kb on + strand, within CA265_RS07520 at 1895.159 kb on + strand, within CA265_RS07520 at 1895.159 kb on + strand, within CA265_RS07520 at 1895.159 kb on + strand, within CA265_RS07520 at 1895.160 kb on - strand, within CA265_RS07520 at 1895.180 kb on - strand, within CA265_RS07520 at 1895.182 kb on - strand, within CA265_RS07520 at 1895.188 kb on + strand, within CA265_RS07520 at 1895.188 kb on + strand, within CA265_RS07520 at 1895.189 kb on - strand, within CA265_RS07520 at 1895.189 kb on - strand, within CA265_RS07520 at 1895.197 kb on - strand, within CA265_RS07520 at 1895.363 kb on + strand, within CA265_RS07520 at 1895.482 kb on + strand, within CA265_RS07520 at 1895.513 kb on + strand, within CA265_RS07520 at 1895.532 kb on + strand, within CA265_RS07520 at 1895.533 kb on - strand, within CA265_RS07520 at 1895.552 kb on + strand, within CA265_RS07520 at 1895.553 kb on - strand, within CA265_RS07520 at 1895.575 kb on + strand, within CA265_RS07520 at 1895.596 kb on - strand, within CA265_RS07520 at 1895.729 kb on - strand, within CA265_RS07520 at 1895.748 kb on - strand, within CA265_RS07520 at 1895.855 kb on + strand, within CA265_RS07520
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,892,828 - -0.0 1,892,913 + +0.4 1,892,920 + -0.3 1,892,922 + -0.5 1,892,963 + +0.2 1,893,051 - -0.4 1,893,058 - -0.1 1,893,059 + -0.1 1,893,060 - -1.3 1,893,101 - +1.1 1,893,208 + -2.1 1,893,237 - +0.7 1,893,252 - +0.6 1,893,276 + -0.7 1,893,331 + +0.4 1,893,332 - -0.2 1,893,483 - -0.6 1,893,524 + +0.2 1,893,525 - +0.3 1,893,552 + +0.9 1,893,628 + +0.7 1,893,629 - +0.6 1,893,631 - -0.2 1,893,637 - -0.1 1,893,649 + +0.9 1,893,649 + -0.5 1,893,650 - +0.9 1,893,658 + +0.1 1,893,720 - +0.4 1,893,728 + -1.1 1,893,749 + -0.3 1,893,750 - -2.1 1,893,802 + -1.3 1,893,803 - -1.6 1,893,803 - -2.0 1,893,836 + CA265_RS07515 0.11 -0.9 1,893,836 + CA265_RS07515 0.11 -0.6 1,893,837 - CA265_RS07515 0.11 -0.5 1,893,859 - CA265_RS07515 0.13 -1.8 1,894,136 - CA265_RS07515 0.37 -0.8 1,894,167 + CA265_RS07515 0.40 -0.8 1,894,167 + CA265_RS07515 0.40 -0.5 1,894,172 + CA265_RS07515 0.40 -0.4 1,894,214 + CA265_RS07515 0.44 +0.5 1,894,238 - CA265_RS07515 0.46 -1.3 1,894,238 - CA265_RS07515 0.46 -2.6 1,894,256 - CA265_RS07515 0.48 -2.4 1,894,309 + CA265_RS07515 0.52 -2.2 1,894,311 + CA265_RS07515 0.52 -1.1 1,894,312 - CA265_RS07515 0.52 -0.5 1,894,315 + CA265_RS07515 0.53 -1.3 1,894,315 + CA265_RS07515 0.53 -1.8 1,894,363 + CA265_RS07515 0.57 -0.4 1,894,364 - CA265_RS07515 0.57 -2.9 1,894,409 + CA265_RS07515 0.61 +0.3 1,894,481 - CA265_RS07515 0.67 +0.9 1,894,527 + CA265_RS07515 0.71 -0.9 1,894,644 + CA265_RS07515 0.81 +0.4 1,894,645 - CA265_RS07515 0.82 -0.3 1,894,645 - CA265_RS07515 0.82 -0.7 1,894,727 - CA265_RS07515 0.89 +0.8 1,894,859 - -0.3 1,894,917 + -0.6 1,894,969 + +0.6 1,895,127 - CA265_RS07520 0.11 -0.2 1,895,150 + CA265_RS07520 0.13 -0.3 1,895,159 + CA265_RS07520 0.14 +0.2 1,895,159 + CA265_RS07520 0.14 -0.2 1,895,159 + CA265_RS07520 0.14 +0.3 1,895,159 + CA265_RS07520 0.14 +0.0 1,895,160 - CA265_RS07520 0.14 +0.3 1,895,180 - CA265_RS07520 0.16 -0.6 1,895,182 - CA265_RS07520 0.16 +0.6 1,895,188 + CA265_RS07520 0.17 -0.1 1,895,188 + CA265_RS07520 0.17 -0.8 1,895,189 - CA265_RS07520 0.17 +0.1 1,895,189 - CA265_RS07520 0.17 -0.2 1,895,197 - CA265_RS07520 0.18 -0.2 1,895,363 + CA265_RS07520 0.34 -0.1 1,895,482 + CA265_RS07520 0.47 -0.1 1,895,513 + CA265_RS07520 0.50 -0.2 1,895,532 + CA265_RS07520 0.52 -0.4 1,895,533 - CA265_RS07520 0.52 +0.8 1,895,552 + CA265_RS07520 0.54 -2.6 1,895,553 - CA265_RS07520 0.54 -0.0 1,895,575 + CA265_RS07520 0.56 -0.0 1,895,596 - CA265_RS07520 0.58 +0.5 1,895,729 - CA265_RS07520 0.72 -0.7 1,895,748 - CA265_RS07520 0.73 -0.7 1,895,855 + CA265_RS07520 0.84 +0.2
Or see this region's nucleotide sequence